Neomonachus schauinslandi (Hawaiian monk seal): 110579871
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Entry
110579871 CDS
T08474
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsu04131
]
110579871 (VPS50)
Membrane trafficking [BR:
nsu04131
]
Protein recycling
Others
EARP complex
110579871 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
110579871
NCBI-ProteinID:
XP_021545199
UniProt:
A0A2Y9H7D8
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All DBs
Position
12:35931191..36063998
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AA seq
963 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELRDQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCSGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTCASEG
SNMGAEETDFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISR
LMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSIL
QLHEFKFMEQSRSPSVSPSKQPASTSSKTVTLFEQYCSDGNPFEIQANHKDEETEDVLAS
NGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLE
STGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGD
TLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIY
WIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPL
PVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKE
FVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDR
PKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccgacagggtctgaaaagccctccggaaagcctt
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaattccgagaactt
cgagaccagcctagtgaccctcaagctgaacaagagctaattaatagtattgaacaagtg
tatttttcaacggactcatttgatattgttaaatatgagctggagaaactccctcctgtt
ctcaatttgcaagaattagaggagtacagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggagcttgaa
agagttacctcattacagacgggtcttcagttagctgctgttatctgcacaaatgggagg
agacacttgaatattgccaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtgcgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagccgccagcacttttaaacattacagttgcataagt
gaattgaattcaaagcttcaagatactttagaacaaattgaggaacagttggatgtagct
ctttctaaaatttgcaagaattttgacataaaccattataccaaggttcagcaggcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcacatgcacttcactcaagcc
attcataatactgtgtttcaagttgttcttggttatgtggaactatgttcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacacatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaaacatgacaatgaggatactacttgtgcttccgaaggg
agtaatatgggtgctgaagaaactgattttgatcgtggctacataaaaaagaaattagaa
cacggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgcttgga
acagatttgtctatatttaaatacgatgatttcatctttgttttggatataatcagcagg
ttaatgcaagttggagaagaattttgtggtagcaaatctgaagttttgcaagagtccatt
agaaaacagagtgtcaactattttaagaactaccatagaacacggcttgatgaactgaga
atgtttctagagaatgagacatgggagctttgtcctgtgaagtcaaatttcagcatcttg
caacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagtaag
cagccagcctcaacatcctcaaaaacagtgaccttgtttgagcagtactgtagtgatggg
aatccatttgaaatccaggccaaccacaaagatgaagaaacagaagatgtcctggcttct
aatgggtatgaatctgatgaacaagaaaaaagtgcctatcaggagtatgacagtgacagt
gatgttcctgaggaactgaaacgagattatgtggatgagcaaacaggtgatgcgcctgtg
aaaagcgtttctagagaaactctaaaaagcaggaagaagtcagattatagtctaaataaa
gtgaatgcacccatcttaacaaatacaacattgaatgtaataagacttgttggtaaatat
atgcagatgatgaacattcttaagccgattgcctttgatgttatccatttcatgtctcag
ctatttgattactacttgtatgcaatatataccttttttggtcggaatgattcactggaa
tcaacaggactaggccttagtagtagtagactaagaacaactcttaacagaatacaagaa
agccttattgatatggaagtttcagctgatcctactgccaccctcacagcagcagaagag
agaaaggagaaggtaccaagtccacacctcagtcacctagtggttttgacatctggggat
acgttatatgggctggcggaaagagtggtagccacagaatccttggtattcttggccgaa
cagtttgagttccttcagccccatctggatgccgtgatgcccgcagtcaaaaagcccttt
cttcagcagttttattctcagacagtctcaactgccagtgaactacgcaaaccaatttat
tggattgtagccggtaaagctattgattatgaacagatgctgctcctaatggccaatgtg
aagtgggacgtaaaagaaattatgtcacagcacaacatctatgtagatgcactgctaaag
gaatttgagcagtttaacaggaggttaaatgaggtttctaagagagttcggatacccctg
cccgtgtctaatatactttgggaacactgtatacggctggccaacagaactattgtggag
ggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggatttt
caacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaagaa
tttgtggaaacctatattaaagcctactatctaaccgagaatgacatggaacgctggatc
aaagagcacagggagtattcaacgaagcagctgaccaatctggtaaatgtttgcctggga
tcccatatcaataagaaagcaagacaaaaacttctagctgctatagatgatatagataga
cccaaaagataa
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