Neomonachus schauinslandi (Hawaiian monk seal): 110580323
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Entry
110580323 CDS
T08474
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
110580323 (TTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsu03021
]
110580323 (TTF2)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110580323 (TTF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
110580323
NCBI-ProteinID:
XP_021545672
UniProt:
A0A2Y9H292
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Position
4:97263778..97303022
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AA seq
1143 aa
AA seq
DB search
MEVVRCSEHGIVCFLKTGVRDGPNKGKSFYVCPANTCSFVLAADIPVSHCLLHEDCVVGL
QGLLLPPGKEEYRLFFQCIRSKAAGKQWCGSIPWQEPRSKEHSVTNKSQHACEPLHYLST
QQRNPFKVLDKNQEPSLWKQFTKGEAGDKMNDKKQKEKADVLLDQKKEWKPESNCWTKQD
LSSGLEVKKKQPAPQEQLQGEKTEFQRAARENEGMHIRNLSEVKSKQCHGEELRKPSGSL
QEKSHIESHPVQKKSGPLREKETKPLPGIIHSQNPISKPQKGEHVSKEHPKSQEARETKA
RDEPGSQTARQSEPGDGPAPPATGRSLGQRPEAASSDGDENNAVFTSSEPPLLFDSTPDS
HKEENLPFPGQSVQRKPSPVSGVSRKVEPSDPAAQRVYLTTQLKQKKSTLRSVDIQALPD
KGQKLLQQIQELEEALGALALTAEPDTNEKSNAPVPQQRHSTKSTTEPPHLVPPRPLQGQ
GLQPLGSQGLKAACPVAAGGSSWCYGGPTKQDGPHAMWEIISKAIDELHASLESRPGETA
VAEDPAGLKLPLLLHQKQALAWLLWRESQKPHGGILADDMGLGKTLTMIALILTQKNQEK
NKQEDKNTALTWLSRDDSCEFTSHGTLIICPASLIHHWKNEVMKCVSHNMLRVYLYHGPN
RDQRAKALSTYDVVITTYNLLAKEIPTQKEEGVVPGANPGVGKDSAKTPLLRIVWARIIL
DEAHCVRNPRVQTSMAVCRLQAQARWAVTGTPIQNTLLDMYSLLKFLRCSPFDDFRLWKS
QVDNGSKKGGERLSILTKSLLLRRTKDQLDSTGQPLVMLPQRKFQVHHLKLSEDEENVYS
VLLARSRSALRSYLKGREGGGSQSGRSPDNPFSKVAQEFAGPRMVADSQRSSTPHVLLTQ
LLRLRQCCCHLSLLKSALDPAELKSEGLALSLEEQLSVMTLSELCDTEPSPLISLNGEQF
KAELFEDIRASSKISSLLVELEAIRGNSASQKSVVVSQWTSMLQVVASHLRKHGLTYATI
DGSVSPKQRMDLVEAFNSSRGPQVMLISLSAGGVGLNLTGGNHLFLLDMHWNPSLEDQAC
DRIYRVGQQKDVVVHKFICEGTVEEKILHLQEKKKTLAKQVLSGSGKTVKKLTLADLKVL
FGI
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggttaggtgctccgagcacgggatcgtgtgctttctcaagaccggcgtccgc
gatggcccgaataaaggaaagagcttctacgtgtgcccggctaacacctgcagcttcgtg
ctggcagccgatattcctgtctctcattgtttattgcatgaggactgtgtggtagggctt
cagggtttgcttctaccaccaggcaaggaagaatatagattgttcttccagtgcattaga
agtaaggcggcggggaagcaatggtgcggaagtatcccatggcaggagcctcgttccaaa
gagcattctgtaaccaacaagtctcagcatgcctgtgagcctcttcattatctttccacc
cagcagagaaacccattcaaggtcctggacaagaatcaagaaccatctctctggaaacag
ttcaccaaaggcgaagctggggataagatgaatgataagaagcaaaaggaaaaggcagat
gtgctcttggatcaaaagaaggaatggaagcctgaatccaactgctggacgaagcaagat
ctctcatctggcctggaggtaaagaaaaaacaacctgcacctcaagagcagctgcaaggg
gagaagacagagtttcagcgtgcagcaagggagaatgaagggatgcacataagaaacctt
tctgaggttaaatccaagcagtgccatggtgaggagctgaggaaaccatctgggtctctt
caggagaaatcacacattgagagtcatcctgtccaaaaaaaatcagggcctctgagggaa
aaggaaaccaagcctttgcctggaattattcacagtcagaacccaataagcaagccccag
aaaggggaacacgtcagcaaagagcaccccaagagccaggaggctagagaaacaaaggca
agggacgagccaggctcgcagaccgcccgacagtcagagcctggggatgggcctgcgcca
ccggccacagggcgctccctgggacagaggccggaagcggcctccagcgatggcgacgag
aataatgccgttttcacttcctctgagcctcccttgctctttgactcaactccggactca
cacaaggaggagaacctcccgttccctggtcagagtgtgcagagaaaaccatctcctgtc
tcgggtgtttccaggaaggtggagccttcagacccagcagcccaacgtgtgtacctcaca
acacaactgaagcaaaagaagagcacactgagatcggtggacatccaggctcttccagac
aagggtcagaagttgctccagcaaattcaggagttggaggaagcccttggtgctcttgcc
ctcactgcagagccagacactaatgagaagagtaacgctccagtaccacaacagagacac
tccaccaaaagtaccactgagccccctcacttggtgcctccccgacccctgcagggccag
ggtctccagcctctgggttctcaaggactgaaggctgcctgcccggtagctgctggggga
tccagttggtgctatggaggtcctacgaaacaggacggcccccatgccatgtgggaaatc
ataagtaaagccattgatgagctgcacgcgtcccttgagtctcggcccggtgagacagcc
gtggcagaggatccagctgggctgaagctccctttgctactgcaccagaagcaggcgttg
gcctggttgctgtggagggaaagtcagaagccacacggaggaattctggcggatgatatg
ggattagggaaaaccctgacaatgattgcactcatcctgacccagaagaatcaagagaag
aacaaacaagaggacaaaaacacggcattgacttggctttccagagatgactcctgtgag
ttcacttcccatggaacgctgatcatctgtcctgcctccctgattcatcactggaaaaac
gaggtgatgaaatgtgtgagccacaacatgctaagagtctatctctatcatgggcccaat
cgggatcagcgtgcaaaagccctctctacctatgacgtcgtgatcactacctataacctt
ctggccaaggagattcccacacagaaagaagagggggtggtccccggtgcaaaccccggt
gtggggaaggatagtgcaaaaacgcctttgcttcgaatagtctgggctcgaatcatattg
gatgaagctcactgtgtgaggaacccgcgagtgcagacttccatggctgtgtgcaggctc
caagcccaggcccgttgggctgtcactggaacccccattcagaacaccttgttggacatg
tattcactgctcaaatttctccgttgttctccattcgatgatttccgactgtggaagagc
caggttgacaatggttcaaagaaaggaggagaacggttaagtattttaaccaagagcctt
ttgctgaggagaacaaaagaccagctggactccacaggccagcccttggtgatgctgccc
cagcgtaaatttcaagtgcaccatttaaagctttctgaagatgaagagaatgtttacagt
gtccttttggcaagatcaaggtcagctctgcgatcctatctaaaagggcgtgaaggtggg
ggcagccaatctggaagaagccctgataatccattcagtaaagtggcccaggagtttgct
gggccccggatggtggcagactcgcagagatccagcactccccacgtactgttgacccag
ttgctgagacttcgccaatgttgctgtcacctgtctctcctgaaatcggccctggacccg
gcagaactgaaaagcgagggcctcgccctttctctggaagagcagctcagtgttatgacg
ttgtctgaactctgtgacacggagccgtctcccctcatttcccttaatggtgaacagttc
aaggcagagctttttgaggacataagagcgagcagcaagatttcatctctgttggtggaa
ttggaggcaatccgaggaaattcagcgtcccaaaagagtgtcgtggtctcccagtggacc
agcatgctgcaggttgtagcgagccacctcaggaagcatggcctgacttacgccaccatc
gatggctctgtcagccccaaacagagaatggacttggtggaggcctttaacagctccagg
ggcccccaggttatgctaatctctctctcggctggaggtgtgggtctaaacctgactgga
ggaaaccacctttttcttctggatatgcactggaatccatcacttgaagaccaggcctgt
gaccgaatttaccgagtggggcagcagaaagatgttgtcgtgcacaaatttatttgtgag
ggaacagtggaagagaagatcttacacctccaagagaagaagaaaactttggccaaacag
gtcctatcaggatctggcaaaaccgtcaagaagctgactttggctgacctcaaagtcctt
tttggcatctaa
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