Neomonachus schauinslandi (Hawaiian monk seal): 110580339
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Entry
110580339 CDS
T08474
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03022
Basal transcription factors
nsu05017
Spinocerebellar ataxia
nsu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110580339 (GTF2B)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110580339 (GTF2B)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
110580339 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsu03021
]
110580339 (GTF2B)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
110580339 (GTF2B)
Prokaryotic type
Archaeal type
TFB
110580339 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
Sigma70_r4
RB_B
KIF9
Motif
Other DBs
NCBI-GeneID:
110580339
NCBI-ProteinID:
XP_021545691
UniProt:
A0A2Y9H267
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All DBs
Position
4:complement(73263176..73295706)
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AA seq
316 aa
AA seq
DB search
MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PTDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaccagccgcttggatgctcttccaagagtcacgtgtccaaaccatccagat
gcgattttagtggaggactacagagctggtgatatgatctgtccagaatgtggcctggtt
gtaggtgaccgggttatcgatgtggggtctgaatggagaactttcagcaatgataaagca
acaaaagatccatcccgagttggagactctcagaatcctcttctgagtgatggagatttg
tctaccatgattggcaagggtacaggagctgcaagttttgacgaatttggcaattctaag
taccaaaatcggagaacaatgagtagttctgatcgagcaatgatgaatgctttcaaagaa
atcactactatggcagacagaatcaacctccctcgaaatatagttgatcgaacaaataat
ttattcaagcaagtgtatgaacagaagagcctgaagggcagagctaatgatgccatagct
tccgcttgtctctatatcgcctgtagacaagaaggggttcccaggacattcaaagaaata
tgtgccgtgtcacgaatttctaagaaagaaattggtagatgtttcaaacttattttgaag
gcattagaaaccagtgtggatttgattacaactggggacttcatgtccaggttttgttcc
aacctttgtctccctaaacaagtacagatggcagctacacatatagcccgtaaagctgtg
gaactggacttggttcctggaaggagcccgatctctgtggcggcagcggccatttacatg
gcttcacaggcatcggctgagaagaggacccaaaaagaaattggagatatcgctggtgtt
gctgatgttacaatcaggcagtcctacaggctaatctatcctcgagccccagatctgttt
cctacagacttcaaatttgacacccctgtggacaaactaccacagctgtaa
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