Neomonachus schauinslandi (Hawaiian monk seal): 110580359
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Entry
110580359 CDS
T08474
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsu03041
]
110580359 (DDX20)
Enzymes [BR:
nsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110580359 (DDX20)
Spliceosome [BR:
nsu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
110580359 (DDX20)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
110580359
NCBI-ProteinID:
XP_021545721
UniProt:
A0A2Y9H297
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Position
4:92561923..92572486
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AA seq
823 aa
AA seq
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MAAAFEAPAALATVEAAMPAERVAAQLAASEPVPGPVRSLRTAHDVSGPRTRTGDVLLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALAKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHL
QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEEN
VMMKIAQKCNINLLPLPDPIPPGLMEECLDWDVEVKAAMHTYGLASIPTQPLKKQIQKME
RTFQTQKGHGNHVASSKNTSVSSLLVKSKNNPKQKLPVKSHSECGVIEKAMSPKEVGCGI
QLEEQMKNPVEISVENSTSQHQVKEALPVSLPKIPCLSAFKIHLPYSLTFTELVEDYEHY
IKEGLEKPVEIIRHYTGPGDQTVNPQNGFVRNRIPKERVPILASSSQSGDSESDSDSYSS
RTSSQSKGSKSYLEGSSDNQLKDLESTPVDGPISLEQPLNGDDTPHPAEYQESPGIQTKA
RHKEGANQRAKQSRRNPPRRSSYRAQAEPQEDGWYDCHRETHPSFSDAYQDYEEYWRAYY
RAWQEYYAVASQSYYWNAQRHPSWMAAYYMNTIYLQEMMRGNQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgtttgaagcccccgcggccttagcgacggtggaggccgctatgccggcg
gagcgtgtggccgcacagctcgcggcctcggagccagtccccgggccggtgcggagcctg
cggacggctcacgacgtcagcgggccgcggacccgcacgggggacgtgctgctggcggag
ccggccgacttcgagtcactgctgctgtcgcggcccgtgctggaggggctgcgggcggcc
ggcttcgagcggccctcgccggtgcagctcaaggccatcccgctggggcgctgcgggctc
gatttaattgttcaagccaaatctggcactgggaaaacctgtgtgttctctaccattgct
ttggactctcttgttcttgaaaacctaagtacccagattttgatcttggctcctacaaga
gaaattgctgtacaaatacattctgttattacagctattggaataaaaatggaaggctta
gagtgtcatgtctttattggagggactccattatcacaagacaaaaccagacttaaaaag
tgtcatattgctgttggctctcctggcagaattaaacaactgatagaacttgactacttg
aacccaggcagtatacgtctctttattcttgatgaagcagataagcttttagaagaaggc
agcttccaggagcaaataaactggatttattcttccttgcctgccagtaaacagatgttg
gcagtgtcagctacctaccctgaatttttggctaatgctttggcaaagtacatgagagat
cccacttttgtaagactaaattccagtgatccgagtctcataggtttgaagcaatattac
aaaattgtcaattcataccctttggcccataagatttttgaggaaaaggctcagcattta
caggaactattcagcagaatcccgtttaatcaagccttagtcttttctaatttgcacagc
agagcacaacatttggcagatatcctttcttctaaaggctttcctgctgagtgcatttca
ggcaacatgaatcagaatcagcgtcttgatgctatggccaaactgaagcagtttcattgc
agagtcctcatttccacagatttgacttcccgtgggattgatgctgagaaggtgaacctg
gttgtaaatttggatgtaccattggattgggagacatatatgcatcggattggcagagct
ggccgttttggtactttggggttgacagtgacctactgttgtcggggagaagaagaaaac
gtgatgatgaaaattgcccagaaatgtaacatcaaccttcttcctttaccagatcccatt
cctcctggtctaatggaagaatgtttggattgggacgtggaggttaaagctgctatgcat
acatatggcttagcaagtatacctacccagcccttaaaaaagcagatccaaaaaatggag
agaacctttcaaactcagaaaggtcatggtaaccacgtggcttcatctaaaaatacttct
gtatcttcactattagtcaaatcaaaaaataatcctaaacagaagcttcctgtgaaaagc
cactcagagtgtggagtcatagaaaaagcaatgtcaccaaaagaagtgggctgtggcata
caattggaagagcaaatgaagaatcctgttgagatctctgttgaaaactctaccagtcag
caccaggtcaaagaagctttacctgtgtcactgcccaaaattccttgtctgtctgccttt
aaaatccacctgccatactctttgacttttacagaattggtggaggattatgaacactat
attaaagaggggttagagaagcctgtggaaatcatcaggcattacacaggtcctggggat
cagactgtgaatcctcaaaatggttttgtaagaaacagaattcccaaggagagagtgccg
atattggcaagtagtagtcagtctggagactcagagagtgacagtgattcttacagctcg
aggacttcttcccagagcaaaggaagtaagtcctacttggaaggctcttcagataatcag
ctgaaagacttggaatccactcctgtggatggccctatctctttggaacaacctctgaat
ggagacgacacccctcatccagcagagtatcaagaatcacctggaatccagacaaaggcc
aggcataaagagggggctaaccagagagctaagcagagccggagaaaccctcccaggcgg
tcttcctatcgagcgcaggcagaacctcaggaagatggttggtatgactgccacagggaa
acacatccaagtttttctgatgcctatcaggattatgaggaatactggagggcttactac
agggcatggcaggagtactacgctgttgcctctcagtcgtattattggaatgctcagagg
catccaagctggatggcggcttattacatgaataccatttatctccaagaaatgatgcga
ggcaaccagtga
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