Neomonachus schauinslandi (Hawaiian monk seal): 110580385
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Entry
110580385 CDS
T08474
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsu03016
]
110580385 (TRMT13)
Enzymes [BR:
nsu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
110580385 (TRMT13)
Transfer RNA biogenesis [BR:
nsu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110580385 (TRMT13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
110580385
NCBI-ProteinID:
XP_021545747
UniProt:
A0A2Y9H2F4
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Position
4:83110379..83133296
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AA seq
481 aa
AA seq
DB search
MAASAPAPHTTDFPAGGRCSYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDGTEIPEQLVPISSLSEEQLE
NLIKKLRKASEGLNSTLKDQIMSHPALHDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPLLSKEKLPVVGIGKHLCGVATDLALRCLVETYAASCEERNEEPLAKRIK
NDKTEKEINTLAKEGNEKNVPEKWSPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVE
FHYFQRMSSWATCGMRKTSLEASNLTTKRKDKQNGDSEEHDDGGCRITDESTESVPGFLT
VEEKKKIGHLCKLLIDQGRVEYLQQKGFSPALQYYTDPLVSLENVLLTALPNHSSSPETT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctgcgccggccccgcacacgactgactttccggctgggggtcggtgcagt
tactacgtggaaaagaagaagcggttctgcaggatggtggtggcggcagggaaaagattc
tgtggggaacacgctggagccgcggaggaagaaaatgctcggaaaagaattctctgtcct
ttagatccaaaacacacagtatatgaagatcaactagcaaagcatttgaaaaaatgtaac
tcaagagagaagccaaaacctgacttctttattcaagatattaacgcaggcttaaaagat
ggaacagaaatacctgaacagttagttccaatttcttctctctctgaagagcagttggaa
aacttaattaagaaattgaggaaagcaagtgaaggtttgaactctacacttaaagatcaa
attatgtcccatccagcattgcatgatgcccttaatgaccctaaaaatggtgattctgca
accaaacacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgtcgagtttggagcaggaaagggaaaattatctcattgggtt
gatattgcattaaaagatgctgagaaagttcacttcatcctagtagaaaaggtgaccacg
agattcaaggtagatggcaaacacagaaagaaaaattcagtattcgagagacttcaaatt
gatattcaacatttgtgtttgaataagattcctttgctaagcaaagaaaaactacctgtg
gtaggaattggaaagcatctgtgtggtgtggcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttgtgaggaaaggaatgaagaacctttagccaaacgcataaag
aatgataaaacagagaaagaaattaacactttggccaaggaaggaaatgagaaaaatgtc
ccagagaagtggagccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagagtatttcagggctctaggccttggagcagtggaa
ttccactacttccagcgaatgagtagttgggcgacttgtgggatgcgaaaaacatctttg
gaagcctccaatcttaccacaaagagaaaagataagcagaatggtgacagtgaagagcat
gatgacgggggatgcagaatcacggatgaaagcaccgagagtgtccctgggttccttact
gttgaagaaaagaagaaaatagggcatctttgtaaattgctgattgaccaaggccgagtc
gagtatttacagcagaaaggattcagtcctgctttacagtattatacagatcctctggta
tctttggaaaatgtattgttaactgctttaccaaatcattcttcatcaccagaaacaact
gcttaa
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