Neomonachus schauinslandi (Hawaiian monk seal): 110580837
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Entry
110580837 CDS
T08474
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04082
Neuroactive ligand signaling
nsu04721
Synaptic vesicle cycle
nsu04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110580837 (SLC6A12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
110580837 (SLC6A12)
04721 Synaptic vesicle cycle
110580837 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsu02000
]
110580837 (SLC6A12)
Transporters [BR:
nsu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110580837 (SLC6A12)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110580837
NCBI-ProteinID:
XP_021546163
UniProt:
A0A2Y9H3G3
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Position
5:complement(100375756..100401252)
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AA seq
612 aa
AA seq
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MDRKVAVPEDGPPVVSWLPEEGEKLEQEGEEQVKDRGQWTNKMEFVLSVAGEIIGLGNVW
RFPYLCYKNGGGAFFIPYFIFFFTCGIPVFFLEVALGQYTSQGSVTAWRKICPLLQGIGL
ASVVIESYLNIYYIIILAWALFYLFSSFTSELPWTTCSNSWNTEHCMDFLNRSGARTATP
SENFTSPVMEFWERRVLGITSGIHDLGALRWELALCLLLAWVICYFCIWKGVKTTGKVVY
FTATFPYLMLIILLIRGITLPGAYEGIIYYLKPDLLRLKDPQVWMDAGTQIFFSFAICQG
CLTALGSYNKYHNNCYRDCIALCFLNSATSFAAGFVVFSILGFMAQEQGLPISEVAESGP
GLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASVDMFPSQLRKSGR
RELLILAIAVVCYLIGLFLVTEGGMYIFQLFDYYASSGICLLFLAMFEVLCISWVYGADR
FYDNVEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLKYNNIYVYPPWGYSIGW
FLALSSMVCVPLFIIITLLKTQGSFKKRLRQLTTPDPSLPQPKKHLDGGTSQDGGPSPAR
EGLIVGEKETHL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaaagtggcagtccccgaggacgggcctcccgtggtttcctggctccctgag
gagggagagaagttggaacaggaaggcgaggagcaggtgaaggatcggggccaatggacc
aacaagatggagtttgtgctgtcagtggccggggagatcattgggctggggaatgtctgg
aggtttccctatctctgctacaaaaatggaggtggagccttcttcatcccctacttcatc
ttcttcttcacctgtggcatcccagtgttcttcttggaggtggcgctgggccagtacacc
agccaaggcagcgtgacagcctggaggaagatctgtccccttctccagggcattggtctg
gcttctgtggtcatcgagtcctatctgaacatctactacatcatcatcctggcctgggcc
ctcttctacctgttcagctccttcacctctgagctgccctggacgacctgtagcaatagc
tggaacacagagcattgcatggactttctgaaccgctcgggagcccgcacagcgaccccc
tctgagaacttcacctcacctgtcatggaattctgggagagacgtgttttgggcatcacc
tcaggcatccatgatctgggagccctgcgctgggagctggccctgtgcctcctgctggca
tgggtcatctgctacttctgcatctggaaaggggtcaagaccacaggcaaggttgtttat
ttcacagccacgtttccctacctgatgctgatcatcctcttgatccgaggcatcaccctt
cctggagcctatgagggcatcatctattacctgaagccagatttgcttcgcctcaaggac
ccccaggtgtggatggacgcgggcacccagatcttcttctccttcgccatctgccagggg
tgcctgaccgccctgggcagctacaacaagtaccacaacaactgctacagggactgcatc
gccctctgcttcctcaacagtgccactagcttcgcagccgggttcgtggtcttctccatc
ctgggcttcatggcccaggagcaagggttgcccatctccgaagtggccgagtctggtcct
ggtctggccttcatcgccttccccaaggctgtgacaatgatgcccttatcccagctgtgg
tcctgtcttttcttcatcatgctcatcttcctagggctggacagccagtttgtctgtgtg
gagtgcctggtgacagcctccgtggacatgttccccagtcagctccggaagagtgggcgg
cgagagctcctcatcctggccattgcagtcgtgtgctatctgatcgggctcttcctggtt
acggagggcgggatgtatatcttccagctatttgattattacgcttccagtggcatatgc
ctgctcttcctggccatgtttgaagtgctctgcatcagctgggtgtacggggcagatcgt
ttctatgacaacgttgaggacatgattggctacaggccatggcccttggtgaagatctcc
tggctctttctgacccctggactttgcctggccaccttcctcttctccttgagcaagtac
acacctctcaaatacaacaacatctacgtgtaccctccctggggctactccatcggctgg
ttcttggctctctcttccatggtctgcgtcccactctttatcatcatcacccttctgaag
acccagggttccttcaagaagcgcctgcgacagctcaccacccctgaccccagcctgcca
cagcccaagaaacacctggatggtggtaccagccaggacggcgggccttccccagcaagg
gaggggctgatagttggggagaaggagacccacttgtag
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