Neomonachus schauinslandi (Hawaiian monk seal): 110580844
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Entry
110580844 CDS
T08474
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110580844 (CAPRIN2)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
110580844 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
110580844
NCBI-ProteinID:
XP_021546175
UniProt:
A0A2Y9H8L0
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Position
5:75899165..75945043
Genome browser
AA seq
1042 aa
AA seq
DB search
MKSAKPQVNHNQHGESQRAMSPLQSTLSSAASPSQAYETYIDNGLICLKHKIRNIEKKKL
KLEDYKDRLKNGEHLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRR
EHMLKLEAEKKKLRTILQVQYVLQNLTQEHVQKDFKGGLNGAVYLPLKELDYLIKFSKLT
CPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPK
NAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESLMELAQPEIQPQEFLNRRYITEVDYS
SKQDDEQSWEADYARKPNLPKCWDMLTEPDGQEKKQESFKSWEPSVKHQEVSKPAVSLEQ
RKQDPKLRSTLQEEQKKQDVSKPKPAPSHWKQEAPKSKTGYIQEEQKKEETPKPWPVQLQ
KEQDPKKQSPKSWTPVQNEQDITKSWTTNMCEDQDSRQPETPKSWENNVESQKHPLTPQS
QISPKSWGVAPASLIPNDQLLPRKFNTEPKDVPKPMHQPVGSSSTLPKDPVLRKEKLQDL
MTQIQGTCNFMQESILDFDKPSSAIPSSQPPSTTPGSPVASTEQNLPNQSDFLQEPLQAA
ASSVTCSSNACLVTTDQASSGSETEFMTSETPEAAVPPSKQPSSLASPNPPMSKGSEQGF
QSPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEIKESPYSSSYNQSFTTASTQTPP
QCQPPAVHVEQAVLSQEAASYPDGTIQVSNGSLAFYPAQTNVFPRPSQPFVNTRGSVRGC
TRGGRLLTNSYRSPGGYKGFDTYRGPPSITNGNYSQLQFQAREYPGTPYSQRDNFQQCYK
RGGTSGGPRTNSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSMTPVDVPVTSPAATIL
PVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTY
VFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLH
RGAIYGSSWKYSTFSGYLLYQD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagccaagccccaagtgaaccacaatcagcatggggaaagccagcgggccatg
agccccttgcagtctactctcagttctgctgcctctccttcccaagcatatgagacatat
attgataatggactcatatgccttaaacacaaaattagaaacatcgagaaaaagaagctc
aaactggaagactacaaggatcgcctgaaaaatggggagcaccttaatccagaccagttg
gaagcagtggagaaatatgaagaagtactacataacttagaatttgccaaggaacttcag
aagaccttttctggactgagccaagatctacttaaagcgcagaagaaggctcagagaagg
gagcacatgctaaaacttgaggctgagaagaaaaaacttcgtactatacttcaagttcag
tatgtattacagaacttgacacaggaacatgtacagaaggatttcaaagggggcttgaat
ggtgcagtgtatttgcctttaaaagaacttgactacctcattaaattttcaaagttgacc
tgccctgaaagaaatgaaagtctgagtgttgaagaccagatggagcagtcatccttgtac
ttttgggaccttttggaaggtagtgagaaagcagtggtaggaacgacatacaaacacatg
aaagatctgctgtctaaattgctgaactcaggctattttgagagtatcccagtcccaaaa
aatgctaaggaaaaagaagtgtcattggaggaagaaatgctaataaaatcagagaagaaa
aaacaattactgaaaactgaatctgtcaaagagtcagagtctcttatggaacttgcacag
ccagagatacaaccccaagagtttcttaacagacgctacataacagaagtagattattca
agcaaacaagatgacgagcaatcttgggaagcagattatgctagaaaaccaaatctcccc
aaatgttgggatatgcttactgaaccagatggtcaggaaaagaaacaggaatccttcaaa
tcctgggagccttctgttaagcaccaggaggtatcaaagcctgcagtttccttagaacag
aggaaacaagatccaaaactcaggtccactctgcaggaagagcagaagaagcaggacgtc
tccaaacccaagccagctcctagccattggaagcaagaagctcctaaatccaaaacagga
tatattcaagaagaacagaagaaggaggagacaccaaagccttggccagttcagctgcag
aaagaacaggatccaaagaagcaatctccaaagtcttggacacctgtgcagaatgaacag
gacatcaccaaatcatggaccactaacatgtgtgaagaccaggattcaagacagccagag
actccaaaatcctgggaaaacaatgttgagagtcaaaaacaccctttaacaccacaatca
cagatttctccaaagtcctggggggtagctccagcaagcctcataccaaatgaccagctc
ttgcccaggaagtttaatacagaacccaaagatgtgcctaagcctatgcatcagcctgta
ggttcttcctcgacccttccaaaggatccagtattgaggaaagaaaaactgcaggatctg
atgacccagattcaaggaacttgtaactttatgcaagaatctattctggattttgacaaa
ccttcaagtgcaattccatcgtcacaaccgccttcaactactccaggtagcccagtagca
tctacagaacaaaatctacccaatcaaagtgattttcttcaagagccattacaggctgct
gcttcttcagttacttgtagctcaaatgcttgcttggttactactgatcaggcttcttcg
ggatctgaaacagagtttatgacctcagagactcctgaggcagcagtgcccccaagcaag
caaccgtcttcactagcttctccaaatcctcccatgtcaaagggctctgaacagggcttc
cagtcacctccagcaagtagtagttcagtaaccattaacacagcgccctttcaagccatg
cagacagtattcaatgttaatgcccctctgcctccgcggaaagaacaagaaataaaagaa
tccccttactcatctagctacaatcagagttttactacggcaagtacacaaacaccaccc
cagtgccaaccgccggctgtccatgtggagcaggctgtcctttctcaagaggcggcaagt
tatcctgatggaactattcaagtaagcaatggtagccttgccttttacccagcacagacg
aatgtatttcccagaccctctcaaccatttgtcaatacccggggatctgttagaggatgt
actcgtggtgggagattactaaccaattcgtatcggtcccctggtggttataaaggtttt
gatacttatagaggaccaccttcaattaccaatggaaattatagccagctacagttccaa
gctagagaatatcctggaacaccttattcccaaagggataatttccagcagtgttacaag
cgaggagggacatctggtggacctcggacaaattcaagagcagggtggagtgattcttct
caggtgagcagcccagaaagagacaacgaaacctttaacagtggtgactctggacaagga
gactcgcgtagcatgaccccagtggatgtgcctgtgaccagtccagcagccaccatactg
ccagtacacgtctaccccctgcctcagcagatgcgagttgccttctcagcagccagaacc
tctaatctcgcccctggaactttagaccaacccattgtgtttgatcttcttctgaacaac
ctgggagaaacctttgatcttcagcttggtagatttaattgcccggtgaatggcacttac
gtgttcatttttcacatgctaaagctggcagtgaatgtgccactgtatgtcaacctcatg
aagaacgaagaggtcttggtatctgcctatgccaatgacggtgctccagaccacgaaact
gctagcaatcatgcaattcttcagctcttccagggagaccagatctggttacgtttgcac
aggggagcgatttatggaagtagttggaaatactccacattttcaggctaccttctttac
caagattga
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