Neomonachus schauinslandi (Hawaiian monk seal): 110581396
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Entry
110581396 CDS
T08474
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu02010
ABC transporters
nsu04148
Efferocytosis
nsu04975
Fat digestion and absorption
nsu04979
Cholesterol metabolism
nsu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110581396
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110581396
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
110581396
04979 Cholesterol metabolism
110581396
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110581396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsu02000
]
110581396
Transporters [BR:
nsu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110581396
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
110581396
NCBI-ProteinID:
XP_021546894
UniProt:
A0A2Y9HC81
LinkDB
All DBs
Position
13:complement(66533865..66661606)
Genome browser
AA seq
2261 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVLGNFNKSIVSRLFSDAQRLLLYSQKDT
SMKDIHQVLRTLQQIERSSPGLKLQDFLVDNETFSGFLTYNLSLPRLTVDKMLGANVSLH
KVFLQGYHLHLTNLCSGSKLQEVIQLGELEVSTLCSLPREKLDAAEQVLRSNMDILKPIL
RELNSTSPFLNKELVKATETLLDSLGTLAQELFSMNSWSDMRQEVMFLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTDEDADSFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPVTRQVMAEVNKTFQELAVFHDVQGMWEELS
PKIWTFMESNPEMDLVRTLLDSRSNDHFWEQQLDGLDWTAKDILAFLAKHPEDVQSANGS
VYTWREAFNETDQAIQTISRFMECVNLNKLEPVATEVRLISKSMELLDERKFWAGIVFTG
ITPDSVELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSMFAVVTILQCFLISTLFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFTLKIFVS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTISVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGASEICVEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRFEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAELEQMALDVG
LPPSKLKSKTSQLSGGMKRKLSVALAFVGGSRVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDVDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDMGTQELLNALTRHPGFGTRCMEGNPIPDMPCSVGEEEWTTAP
VPQTITDLFQNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNNAIKQVKK
HLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRASLQK
GENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVDAKLPPLNDEDEDVKRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSD
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttattggcctcagttgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacttgtcagctgttgctggaagtggcctggcctctgtttatcttcctgatcctgatc
tccgtccggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccgactcccggtgaggcccctggggttcttggaaactttaacaaatcc
atcgtgtctcgcctgttctcagatgctcagcggcttcttctgtatagccagaaagacacc
agcatgaaggacatacaccaagttctgaggacgttgcagcagatagagcgttccagtcca
ggcttgaagcttcaggatttcctagtggacaatgaaaccttctctggattcctgacttac
aacctttctctgccaaggcttactgtggacaaaatgctgggagccaatgtcagtctccac
aaggtatttttgcaaggctaccacttacatttgaccaatctgtgcagtggatccaaatta
caggaggtgattcaacttggtgaactagaagtttccacgctttgcagcttgccaagggag
aaactggatgccgctgagcaagtgcttcgttccaacatggacatcttgaagccgatcctg
agggaactaaactctacatctcccttcctgaacaaggaactggttaaagccacagaaact
ttgctggatagtctcgggactttggcccaagagctgttcagcatgaacagctggagcgac
atgcggcaggaggtcatgttcctgaccaacgtgaacagctccagctcgtccacccagata
taccaagccgtgtcccgcatcgtctgtggccatcccgagggcgggggcctgaagattaag
tccctcaactggtatgaggacaacaactacaaagctctctttggcggcaacggcacggat
gaagatgctgacagcttttatgacaattctacaactccttattgcaatgatctgatgaag
aatttggagtccagtcccctttcccgcatcatatggaaagctctcaagcctctgcttgtt
gggaagatcctgtatacacctgacactccagtcacaaggcaggttatggccgaggtgaat
aagacctttcaggaactggctgtgtttcatgatgtgcaaggcatgtgggaagagctcagc
cccaagatctggaccttcatggagagtaacccggaaatggaccttgttcggacactgttg
gacagcagaagcaatgaccacttttgggaacagcagttggatggcttagactggactgcc
aaagatattctggcatttctggccaagcacccagaggatgtccagtctgctaacggctct
gtgtacacctggagagaagctttcaatgagactgaccaggcaatccagaccatctctcgc
ttcatggagtgtgtcaacttgaataagcttgaaccggtagcaacagaagtccggctcatc
agcaagtccatggagttgctggacgagcggaagttctgggctggtatcgtgttcaccgga
atcactcctgacagtgtggagttgccccgtcatgtcaagtacaagatccgaatggacatt
gacaatgtggagaggacaaataaaatcaaggatgggtactgggaccccggtcctcgggct
gacccctttgaggatatgcggtatgtctgggggggctttgcctacttacaagatgtggtg
gaacaggcgatcatcagggtgctgacgggcaccgagaagaaaactggtgtctatgtgcag
cagatgccctatccctgttatgtcgatgacatcttcctgcgggtgatgagccggtccatg
cccctgttcatgacgctggcctggatctactccgtggctgtgatcatcaagggcatcgtg
tatgagaaggaggcgcggctgaaggaaaccatgcgcatcatgggcctagacaatggcatc
ctgtggttcagctggttcatcagtagcctcattcctctgctcgtgagcgccggcctgctt
gtggtcatcctgaaattaggaaacctgctgccctacagtgaccccagcgtggtgtttgtc
tttctgtccatgttcgccgtggtgaccatcctgcagtgtttcctgatcagcacactcttc
tcaagagccaacctggcggcagcctgtgggggcatcatctacttcattctctacctgccc
tacgtgctgtgcgtggcatggcaagactatgtgggcttcacgctcaagatctttgtgagc
ctgctgtctcctgtggctttcgggtttggctgtgagtactttgccctttttgaggagcag
ggcattggggtgcagtgggacaacctgtttgagagccccgtggaggaagatggcttcaac
ctcaccatttcagtctccatgatgctgttcgacaccttcctctatggagtgatgacgtgg
tacatcgaggctgtctttccaggccagtatggaatccccaggccctggtattttccttgc
accaaatcctactggttcggtgaggaaagtgatgagaagagccaccctggttccagccag
aagggagcatcagaaatctgcgtggaggaggagcccacacacctgaagctgggcgtgtcc
attcagaacctgatgaaggtttaccgggatggcatgaaggtggctgttgatggtctggcc
ttgaatttctatgagggccagatcacctccttcctgggccacaatggagctggcaagacc
accaccatgtcaatcctgaccgggttgttccctcccacctcgggcactgcctacatcctg
ggaaaagacattcgctttgagatgagcaccatccggcagaacctgggggtctgcccccag
cataacgtgctgtttgacatgctgactgtggaagaacacatctggttctatgcgcggctg
aaggggctctcggagaagcacgtgaaagcagagctggagcagatggccttggatgtcggt
ttgccacccagcaaactgaaaagcaaaacaagtcagctgtcaggcggaatgaagagaaag
ctgtctgtggctttggcctttgttgggggatccagggttgtcattctggacgagcccaca
gccggtgtggacccttactcccgcaggggaatatgggagctcctgctgaaataccgacaa
ggccgcaccattattctctccacacaccacatggatgaagcagacatcctgggggacagg
attgccatcatttcccatgggaagctgtgctgtgtgggctcctccctatttctgaagaac
cagctgggaacaggctactacctgaccctggttaagaaggatgtggaatcctccctcagt
tcctgcagaaatagcagtagcactgtgtcgtacctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tcggccatctccaacctcatcaggaagcacgtggctgaggcccggctagtggaagacatt
gggcatgaactgacttacgtgctgccctacgaagctgccaaggagggggcctttgtggaa
ctcttccatgagattgatgaccggctctcagacctgggcatctccagttacggcatctcg
gagacgaccctggaagaaatatttctcaaagtggccgaagagagtggggtggatgctgag
acctcagatggcaccttgccagccagacgaaacagacgggccttcggggacaagcagagc
tgccttcgcccattcactgaagatgatgctattgatcctaatgattctgatgtagaccca
gaatccagagaaacagacctgctcagcgggatggatggcaaaggctcctaccaggtgaag
ggctggaagctcacacagcagcagtttgtggcccttctgtggaagaggctgctgattgcc
agacggagtcggaagggattctttgctcagatcgtcctaccagctgtgtttgtctgcatt
gccctggtgttcagcttgatcgtgcccccctttggcaagtaccccagcctggaacttcag
ccctggatgtacaacgaacagtacacgttcgtcagtaatgatgctcctgaggacatgggc
acccaggaactcttgaatgccctcaccagacaccccggcttcgggacccgctgtatggaa
ggaaatccaatcccagacatgccctgctcggtgggggaggaggagtggaccaccgccccc
gttccccagaccatcacggacctcttccaaaatgggaactggacgatggagaacccctca
cccacctgccagtgtagcagtgacaaaatcaagaagatgctgcccgtgtgtcccctgggg
gcaggggggttgcctcctccacaaagaaaacagaacactgcagacatccttcagaacctg
acgggaagaaacatttcggattatctggtgaagacctatgtgcagatcatagccaaaagt
ttaaagaacaagatctgggtgaatgagtttaggtatggagggttttccctgggtgccagt
aattctcattcacttccttcaagtcaagaagttaataatgccatcaagcaagtgaagaag
cacttgaagctggccaaggacagttctgcagatcgatttctcagcagcttggggaggttc
atgacaggactggacacgaaaaataacgtcaaggtgtggttcaacaacaagggctggcat
gccatcagctctttcctgaacgtcatcaacaatgccattctgcgggccagcctgcagaag
ggagagaaccccagccagtatgggattactgccttcaatcaccctctgaatctcaccaag
cagcagctctcggaagtggctctgatgaccacgtcagtggatgtccttgtgtccatctgt
gtcatcttcgcgatgtcctttgtcccggccagctttgttgtgttcctgatccaagagcgg
gtcagcaaagcaaagcacctgcagttcatcagtggagtaaagcctgtcatctactggctt
tccaatttcgtgtgggatatgtgcaactatgtggtccctgccacgctggtcattatcatc
ttcatctgcttccagcagaagtcctatgtgtcctctaccaacctgcctgtgctggccctt
ctacttctgttgtacgggtggtcgatcacacctctcatgtacccagcctccttcgtgttc
aagatccccagcacagcctacgtggtcctcaccagcgtgaacctcttcattgggatcaac
ggcagtgtggccacttttgtgctggagctctttaccaacaataagctgaataacatcaat
gatatcctgaagtccgtattcttgatcttcccacatttttgcctgggacgggggctcatt
gacatggtgaaaaaccaggcaatggctgacgccttggaaaggtttggggagaaccgtttt
gtttcgccactgtcttgggacttagtgggacggaacctcttcgccatggccgtggaaggg
gtggtattcttcctcatcactgttctcatccagtacagattcttcatcaggcccagacct
gtagatgcaaagcttcctcctttgaatgatgaggatgaagatgtgaagcgggaaagacag
agaattcttgatggtggaggacagaacgacatcttggaaatcaaggagctgactaagata
tatagaagaaagaggaagcctgccgttgacaggatttgcgttggcattccgcctggcgag
tgctttggacttctgggggttaatggggctgggaaatcatcaactttcaagatgttaact
ggagataccactgttaccagaggagatgctttcctgaacaaaaatagtatcttgtcagac
atccatgaagtccatcagaacatgggctattgccctcagttcgatgccatcacggagcta
ttgaccggaagagagcacgtggagttctttgccctcttgagaggagtcccagagaaagaa
gttggcaaggttggtgaatgggcaattcggaaactgggccttgtaaagtatggagaaaaa
tatgctggcaactacagtggaggcaacaagcgcaagctctcaacggccatggctctgatc
ggcgggccccctgtcgtgtttctggatgaacctaccacaggcatggatcccaaagcccgg
cgattcttgtggaattgtgccctaagtattgtcaaggaaggcagatcagtagtgcttaca
tctcatagtatggaagaatgtgaagctctttgcactaggatggcaattatggtcaatggg
aggttcaggtgtctcggcagcgtccaacatctgaaaaataggtttggagatggttacaca
atcgtggtacggatagcagggtccaaccctgacctgaagcctgtccaggagttcttcgga
cttgccttcccgggaagtgtcctcaaagagaagcaccggaacatgctacagtaccagctt
ccatcttcactatcttctctggccaggatattcagcatcctttcccagagcaaaaagaga
ctccacatagaagactactctgtttctcagacaacgcttgaccaagtatttgtaaacttc
gccaaggaccaaagtgatgatgaccacttaaaggacttgtcattacacaaaaaccagaca
gtagtcgatgttgcagttctcacatcttttctccaggatgagaaagtgaaagaaagttac
gtatga
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integrated database retrieval system
