Neomonachus schauinslandi (Hawaiian monk seal): 110581421
Help
Entry
110581421 CDS
T08474
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsu03036
]
110581421 (SHOC1)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
110581421 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
110581421
NCBI-ProteinID:
XP_044776336
UniProt:
A0A8M1MR49
LinkDB
All DBs
Position
13:complement(72098369..72188142)
Genome browser
AA seq
1508 aa
AA seq
DB search
MFSTFKYCAIDYLYENIVRKKFCRDALLLRVPSCLYQDGNYAGVIDSKFRRPWMRVSAVS
VWGMTDDISVLDQWKASLFVEEFLEKKTITGMVTQIDCGFEEVVPSSNPNSQTEVEEASL
YTHKDYTEVFTLVSGLEKCPALQTQDEDLSIDEEIIFLNNLMAYKSQLPTLHTLLSRLKL
FLVKDPILDFKGQIFTEANFFRECFSFQEDLKGLVEEDFYMDKENFSQEKLEDTVGLNQT
PSILPECEFLIPTSLKQEVDIPSLSKLKESLNLMPEIINYTDENEKLFRIDLTTKHGIDI
EDIKCSFTEILAIQSYCEPEYSEPVELEMPLTHLHLTNQHSSMTSLCTGLQTFPFSPICK
ISLLTAEESANKNWTVWQLESCRSSLKPFLLTVPRSEEPNSQYSVMDLKKIFSIEEESLV
VNPVSTEWWGKGGLNLKEAETLEHLNTYLCHDDLSSDDTKMEIFLPTKVLQLESWLEHES
CSSPIVLINETSTNDHLLLPQKISSPAEEVPDLCFSDDNFSVKRPKEEKPKNDLELVYRI
SQNKENEDYLERDCTVPSIESSSSPKIEKASFKHGKKWENDLDLLSDFIMLRNKYKTCTS
KTEVTDSKEDDDKEEHSLTLQEESPPVCTNKAIEKINQERRVDNVIEIQASESQCQAFCL
LEAAATPILKKLVCLCTLPAANWTFATVIFDQTRFLLKEQEKVISDAIQQGTNDEKEMTF
KHAALLHLLVTIRDVLLTCSLDTALGYLSNAKDIYRSILGSYLDDIWRQLEIVQFIREKK
PETNYKIQELQCQILNWMQSEQQIKVLIIVRMDSDGEKHSLIKILNKMEGLTLTVLHSNR
RKDFVESEGVLNGTSSCVVVHNQYIGSDFPWSNFSFVVEYNFIENSCWTKHCEKLNIPHK
VFKVILPDTVLKRSTLLDSFGGFLLEIQVPYVFFASEGLLNTPEILRLLESKYNITLVER
CCSESLKLFGCTECYVVVTVDEHTAIILQDLEELNCEKASDNIIMRLMALSLQYSCCWII
LYTKKTLNSEYHLTEKTLHHLALIYAALISFGLKSEELDVKLIIAPGVEEAALIIRQIAD
HNLMTSKREPHEWLDKSWLEVSPSKEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLC
QLQELLPEVPEKVLKHFCSITSLFKISSSSITNSPPSPLPQENGNQTSTFTSQSSASGSS
NSVFQEHNEYYHYSDTGETVHRDTNSTSNYNSSLMELREMPCILPPVTSYNQASYWKDSS
CNPNTVHNPFLVNTESRNVAGNSFRNQNDSESDVFYLDLTQMNCEDISPIDTQKRVAPNF
INYQKKGTHDAKGPINKEVSAPSFSLEGSQSSLPWNFKKNVWEQQNHSFNLEYGVQQTTC
DKWYSQKDNLFTNQQKCLSDELEGFICESSNAGTKKTFWKELPSVSSLDLFCASDPNVNK
KEFSSLYFHQRAGKCLGQKRHSESSSNSGDKKSLPDFMCSQLPQFKKRRLVYEKVPGRVD
GQTRLRFF
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaacattcaaatattgtgcaatagactatttatatgagaatatagttagaaag
aagttttgcagagatgctttattgcttcgagtcccttcatgtttatatcaagatggaaat
tatgcaggagttattgatagtaagtttaggaggccatggatgagagtttcagctgtttca
gtgtggggaatgacagatgatatttcagtcttggatcaatggaaagcaagtctctttgtg
gaggagttcctagagaaaaaaacaattacaggaatggtgactcagattgactgtgggttt
gaggaagttgttccaagttcaaacccaaactcccaaactgaagtagaagaagccagttta
tatacccataaggactacactgaagtctttacacttgtcagcggtttagaaaaatgtcca
gcacttcaaacacaggacgaagatttgtctattgatgaagaaataatttttttaaataac
ttgatggcctataaaagtcagctaccaactttgcatactttgttgagtaggctaaaacta
tttttggtaaaggaccccattttagatttcaaaggacagatcttcacagaagctaatttc
ttcagggaatgtttctcttttcaagaagatttgaaaggtctagtggaagaagatttttac
atggataaagagaactttagtcaggaaaagctagaagatacagtaggtttaaatcaaact
ccatcaattttgcctgaatgtgaattcttaatacctacaagcctcaaacaagaagttgat
attccatcactctccaaactgaaggaatccttaaacttaatgccagaaataataaattat
acagatgaaaatgaaaagcttttcagaatagatcttactaccaagcatggaattgacatt
gaggatataaaatgcagctttacagagattttggccattcaaagctattgtgaaccagag
tacagtgaaccagtagagttagaaatgccattaactcatctacatctaacaaaccaacat
tcttccatgacttcattatgtacaggacttcagacatttccattttctcctatttgtaaa
attagtttgcttactgctgaagaatcagctaacaaaaactggacggtgtggcagttagaa
agctgcagaagctcattgaaaccatttttgcttacagtgccaagaagtgaagagcccaac
agtcaatattcagttatggatttgaaaaagatattttctattgaagaagaaagtcttgta
gttaatcctgtaagcacagagtggtggggaaaaggaggactaaatctgaaagaggcagaa
actttggaacatctgaatacatatttgtgtcatgatgatctatcttctgatgatactaaa
atggagatatttttgccaacaaaagtgcttcagttagaatcatggctagaacatgaaagt
tgttcctcacctattgtacttattaatgagacatctacaaatgatcatttattacttcca
caaaagatttcatctccggcagaagaagtaccagacctgtgtttttctgatgacaatttt
tctgttaaacgaccaaaagaagaaaaaccaaagaatgatctagaactagtttatagaata
agccaaaataaagaaaatgaagattacttggaacgtgactgcacagtaccatctattgaa
tcatcttcctctccaaaaattgaaaaagcatcttttaaacatggtaaaaaatgggagaat
gatttggaccttttgagtgacttcattatgctgcgaaataaatataaaacttgcacctca
aagactgaagtcacagacagtaaagaagatgatgataaagaagaacattctttgactctt
caggaagaaagtcctcctgtttgtactaataaagccatagagaaaataaatcaggaaagg
agagtggataatgtcattgaaattcaagcatcagagagccagtgccaagcattctgtctc
ctagaagcagcagctactcctatcttaaaaaaacttgtatgcctctgtactctccctgct
gctaattggacatttgccactgtcatttttgaccaaacaaggttcctcttaaaggaacaa
gaaaaagtaataagtgatgctattcagcaaggtacaaatgatgaaaaagaaatgacgttc
aagcatgctgctctcttacatcttctggtaacaattagagatgtccttttaacatgtagc
ttggacacagcattgggatatttgtcaaatgcaaaagatatctacagaagcattttaggc
tcctatttggatgacatttggagacagctggagattgtacagtttattagggaaaaaaag
cctgaaaccaactacaagatacaagaactgcaatgtcagatactaaattggatgcaaagt
gagcaacagattaaggtgctgattatagtaagaatggactcagatggtgaaaaacattca
ctcattaaaatccttaacaaaatggaaggtttaacattgactgtcttacattcaaacaga
aggaaagattttgtggaatctgaaggtgttttaaatggtacaagttcctgtgtagttgta
cataatcaatatattggatcagatttcccctggagtaacttctcatttgtggtggaatac
aattttatagaaaactcttgttggactaaacactgcgagaaattgaatattcctcacaag
gtcttcaaagtgattcttccagacacagttttaaagagaagcaccttgctggatagtttt
ggtggatttcttttggaaattcaggttccatatgtgttttttgcatctgaaggacttctt
aatactccagaaatacttcggttgctagaatccaagtacaatatcacactagtggagaga
tgctgcagtgagtcgttgaaactctttggatgtacagagtgttacgtggtggtgacagtt
gatgaacacactgccataattttgcaggacctagaagaattgaattgtgagaaggcatca
gacaatatcattatgagactgatggcattatcactccagtacagctgttgttggataatc
ttatatacaaaaaaaacattaaactcagagtaccatcttacagaaaaaacacttcatcat
ctagcactgatttatgcagctttgatatcatttgggctaaaatcagaagaactggatgta
aagcttataattgccccaggagtggaagaggctgcactgataattcggcaaattgctgat
cacaatttaatgacctcgaagagagaacctcatgaatggttggataaatcctggcttgaa
gtttcaccatctaaggaagaaatgtacttacttgactttccatgtattaacccattggtg
gctcagctcatgttaaacaaaggaccttcactgcactggatattattagcaactctgtgt
caacttcaggagcttttacctgaagttccagaaaaggtgttaaagcatttttgtagcatc
acttccttattcaagattagttcttcttccataacaaattcacctccaagtccattacct
caggaaaatgggaatcagactagtacctttacctcccagagttcagcttctggctcttca
aactctgtctttcaagaacataatgaatattaccactattcagatacaggagagacagtg
cacagagatacaaacagcacttcaaactataactcttcccttatggaactaagagaaatg
ccatgcattttaccacctgtgacttcttacaatcaggccagctactggaaggactccagt
tgtaaccctaacacagtgcacaatcctttcctggttaatacagaatcaaggaatgtggct
ggtaactcctttcgaaaccaaaatgattcagagtcagatgtcttttatttggatctaaca
caaatgaactgtgaagacatatcaccaattgacactcagaagagagttgcccctaatttt
ataaattaccagaaaaagggaacacatgatgcaaaaggacctataaataaagaagtgtct
gcccctagcttttcactagaaggctcccaatcttctcttccctggaactttaagaaaaat
gtatgggaacaacagaatcactcattcaacttagaatatggtgtacagcagactacatgt
gacaaatggtactctcagaaagataatttattcactaatcagcaaaaatgtctatcagat
gagttagaaggcttcatatgtgaaagttcaaatgctgggactaaaaagactttctggaaa
gaattaccatctgtctccagtttggatttattttgtgcttctgatcctaatgtaaataaa
aaagaattcagcagtctttatttccaccaaagagctggaaaatgtttaggacagaaaagg
cactctgaatcctcatctaactcaggagacaagaaatcattaccagatttcatgtgctca
caattaccacaattcaaaaaacggcgtctagtgtatgaaaaagtccctggtagagttgat
ggacaaactcgtctgaggtttttttga
DBGET
integrated database retrieval system
