Neomonachus schauinslandi (Hawaiian monk seal): 110581448
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Entry
110581448 CDS
T08474
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110581448 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110581448 (APTX)
Enzymes [BR:
nsu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
110581448 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
110581448 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
110581448 (APTX)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
110581448 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
110581448 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
zf-C2H2_6
zf-C2H2
zf-C2H2_4
Glycoamylase
Motif
Other DBs
NCBI-GeneID:
110581448
NCBI-ProteinID:
XP_021546973
UniProt:
A0A2Y9H5R8
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All DBs
Position
13:complement(55824444..55843488)
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AA seq
342 aa
AA seq
DB search
MMRVCWLVRQDNRHQRIKLPHLEAVMVGRGPETKIVDKKCSRQQVQLKAECNKGYVKVKQ
VGVNPTSIDSVIIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAESPGLETHRKRKRSGN
SDSVERDAAQEAESCRGLEPGSDPGQSSVPSKKGKDASTKKESLGHWSQGLKISMQDPKM
QVYKDEQVVVIKDKYPKARHHWLVLPWASISSLKAVTREHLELLKHMHTVGEKMITDFAG
SSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQDA
GTVSVRDGMPELLRLPLRCHECQESLPSIPQLKEHLRRHWPQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatgagggtgtgctggttggtgagacaggataaccggcaccagcgaatcaaacttccc
catttggaagcagtcatggttgggcgtggcccagagaccaagattgttgacaagaaatgt
tctcgacagcaagtacagttgaaagcagagtgtaacaaaggatatgtcaaggtgaagcag
gtaggggtcaatcccaccagcattgactcagtcataattgggaaggaccaagaggtgaag
ctgcagcctggccaagttctccacatggtgaatgaactttatccatatattgtagagttt
gaggaagaggcagagagccctggcctagaaacacacaggaagagaaagaggtcaggcaac
agtgattctgtagaaagggatgctgcccaggaagctgagtcctgtagaggactggaacct
gggagtgaccctggccaatcctctgtgccctcaaagaaagggaaagatgcatctaccaaa
aaggaatcattgggccactggagtcaaggcttgaaaatttctatgcaggatcccaaaatg
caggtttacaaagatgagcaggtggtggtgattaaggataaatatcccaaggctcgtcat
cactggctggtcttaccatgggcttccatttccagtctgaaggctgtgaccagggaacac
cttgagctccttaaacacatgcacactgtgggggaaaagatgatcacagattttgctggg
tccagcaaactccgcttccgtttgggttaccatgccattcccagcatgagccatgtacac
cttcatgtgatcagccaggattttgattctccttgccttaaaaacaaaaaacattggaat
tctttcaatacagaatacttcctagaatcccaagctgtgatagagatggtacaggacgct
ggcacagtgagtgtccgagatgggatgcctgagctcttgaggctgcccctgcgttgtcac
gagtgtcaggagtcgctgccttccattccccagctgaaagagcatctcaggaggcactgg
ccacagtga
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integrated database retrieval system
