Neomonachus schauinslandi (Hawaiian monk seal): 110582340
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Entry
110582340 CDS
T08474
Symbol
COL8A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110582340 (COL8A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
110582340
NCBI-ProteinID:
XP_021548001
UniProt:
A0A2Y9H8H0
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Position
1:45947483..46108207
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AA seq
743 aa
AA seq
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MAMPPGPPLLGVLLTISLGAIRLIQAGAYYGIKPLPPQIPPQIPPQIPQYQPLGQQGPHM
PLGKNGLNMGKELPRMQYGKEYPHLPQYRKEIQPVPRMGKEAAPKKGKEIPSAGLRGEQG
PRGEPGPRGPPGPPGLPGHGIPGTKGKPGPQGYPGIGKPGMPGMPGKPGAMGMPGAKGET
GPKGETGPMGIPGPQGPPGPHGLPGIGKPGAPGLPGQPGAKGERGPKGPPGPPGLQGPKG
EKGFGMPGLPGLKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGPPGEPGPQGPV
GVPGVQGPPGIPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGD
KGIGGLPGALGPRGEKGPVGAPGMGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGVVGP
QGPPGLKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGHKGLPGLPGAPGLLGP
KGEPGIPGDQGLQGPPGIPGIAGPSGPIGPPGMPGPKGEPGIPGPPGFPGVGKPGVAGLH
GPPGKPGALGPPGQPGLPGPPGPPGPPGPPAVMPPTPPPHGEYLPDMGLAIDGVKPPHAY
GAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPGVY
YFAYHVHCKGGNVWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSE
QAAGLYAGQYVHSSFSGYLLYPM
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggctatgccacctggccctccactgctgggagtgctgcttaccatttccctgggcgcc
atcaggctcattcaggctggtgcttactatgggatcaagccgctgccaccacaaattcct
cctcagatcccaccgcaaattccgcaataccagcctctgggccagcaaggacctcacatg
cctttggggaaaaatggccttaacatgggcaaggagctgccccgcatgcagtatggcaaa
gaatatccacatctaccccaatataggaaggaaattcagccagtgccaagaatgggcaag
gaagcagcacctaagaaaggcaaagaaataccatcagccggtttacgaggggagcaaggt
ccccgtggagagcctggcccaagaggaccgccgggcccccccggcctaccaggtcatggg
atacctggaaccaaaggaaaaccagggccacagggatatccaggaattggaaaaccaggt
atgcctggaatgccaggaaagccaggagccatgggaatgcctggagcaaaaggcgaaact
ggacccaaaggggagacggggcctatggggatcccaggaccgcaagggcctccagggcct
cacggacttcctggcattggaaaaccaggtgcaccagggttaccagggcaaccaggtgca
aagggagagcgaggtcccaaaggaccgccaggacctccaggccttcagggtcccaaaggg
gagaagggctttgggatgccaggcttgccaggcctaaagggccctccagggatgcatggc
cctcctggccccgttggactcccaggagtgggcaaacccggagtgacaggcttccctggg
ccccaaggtcccctgggaaagccgggtcctccaggggaacctgggccccaaggccctgtt
ggggtcccgggagttcaaggacctcctgggattcctggagttggaaaaccaggccaggat
gggatccctggccagccaggctttccaggtggcaaaggggagcaaggactgccagggctg
ccaggacccccaggccttccagggatcgggaaaccaggcttcccaggacccaaaggtgac
aagggcatagggggtcttcctggggctctaggaccaagaggggagaaaggaccagtaggt
gcccccggaatgggaggtcccccaggagagccaggcctgcctggaatcccaggtcctatg
ggtcctccaggtgctattggttttcccggacccaaaggagaaggtggggttgtagggcca
caggggccaccaggtctcaagggcgagccagggcttcagggcttcccagggaagccaggt
ttccttggtgaagtagggccccctggcatgaggggtttgccaggtcccatagggcccaag
ggggaagcggggcacaaaggtttaccagggctccctggtgctccagggctgctgggacca
aagggcgaaccaggaatcccaggggatcagggtttacagggccctccaggcatcccgggg
atcgcaggcccaagtgggcccattggaccacctggaatgccaggccccaaaggggaaccc
gggatcccagggccccctgggttccctggagtagggaagcctggagtggcaggacttcat
gggcccccagggaagcctggtgcccttggtcctccaggccagccgggccttccagggccc
ccaggccctccagggcccccagggcccccagccgtgatgccccctacaccaccaccccat
ggagagtatctaccagatatggggctggcaattgatggagtgaaacccccccatgcctac
ggggctaagaaaggcaagaatggagggccagcctacgagatgcctgcctttacagctgag
ctgactgcgcctttcccacctgtgggggccccggtgaagtttgacaaactgctctataat
ggcagacagaactacaacccacagacgggcatcttcacctgcgaggttccaggggtctac
tactttgcataccacgttcactgcaaggggggcaacgtgtgggttgctctgttcaagaac
aacgagcccatgatgtacacgtacgatgagtacaaaaagggctttctggaccaggcatct
gggagtgcggtgctgttgctcaggccgggagaccgagtgttcctccaaatgccctcggaa
caggctgcaggactgtatgctgggcagtacgtccattcctccttttcaggatatttattg
tatcccatgtaa
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