Neomonachus schauinslandi (Hawaiian monk seal): 110582580
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Entry
110582580 CDS
T08474
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03015
mRNA surveillance pathway
nsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110582580
09123 Folding, sorting and degradation
03018 RNA degradation
110582580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110582580
03041 Spliceosome [BR:
nsu03041
]
110582580
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110582580
mRNA cycle factors
Stress granule specific factors
110582580
Spliceosome [BR:
nsu03041
]
Complex C
Other components
Complex C specific factors
110582580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_occluded
RRM_5
RRM_10
RRM_3
RBD_RDR6
POP1_C
Motif
Other DBs
NCBI-GeneID:
110582580
NCBI-ProteinID:
XP_021548310
UniProt:
A0A2Y9HF71
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Position
X:complement(54360763..54381774)
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AA seq
616 aa
AA seq
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MSASVPHFEMSTLYVGDLHPEVNEAMLYEKFSSAGPILSIRVCRDLVTRRSLGYAYVNFL
LRADTEWALDTMNFDIINGKPLRIMWSQRDPSLRKSGVGNIFIKNLAKSIDSKSLYDTFS
VFGNILSCKVVTDENGSRGFGFVHFEKSEAAKRAIAKMNGILLKGSRVFVGQFKPRKERE
AELRAKANIFTNVYIKNFGDDVDDECLKEVFGEFGSVLSVRVMTDESGKSKGFGFVNFEN
FEDAKKAIEKMNGKVLNGNQIYVGRAQKKLERQSELKHKFEQIKQGKLTKCKGANLYVKN
LEDDIDDRRLREEFSLFGTISSARVMMEAGHSKGFGFVCYTSPEEANKAVMAMNGKIVIT
KPLYVAIAQSKDERQAFLTKNYMERISAVRDRDNAILNYQKITSSNNFIPILPQSQCGNV
HLYKPVVRAKYHPSQNLHYATHSVAVPKPSISTFIQPQVPGVKSTYQITNMTTPKMAVYP
QTSALRPPANQRFKKVTAIANVCRPLKFKVGRPASNQKPIPVGHDISNVSVLASATTQKN
ILGEKLVPLVQSIHPTLAGKISRILLEMDDSELLHMLESPESLRSKVDEAVVVLQAHQAK
EAAQKAVNSTTGVKTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcagttccccactttgaaatgtccacactctatgttggagacctgcacccc
gaagtgaatgaggcaatgctgtatgagaaattcagctctgctgggccaatcctttccatt
cgggtgtgccgtgatctggtaacgcgccgctctctgggctacgcttacgtgaacttcttg
ctgcgggctgatactgagtgggctctggacactatgaactttgatattatcaatggcaag
ccactgcgtattatgtggtcccagcgtgacccatcacttcgtaagagtggagtgggcaat
atattcatcaaaaatcttgccaagtctattgatagtaagtccctttatgatacattttct
gtctttggaaacattctttcttgtaaagtagtaaccgatgaaaacggatcaaggggtttt
ggatttgtgcattttgagaaatcagaagctgctaaaagggccattgcaaagatgaatggt
attctgctgaagggtagccgagtttttgttgggcagtttaaacctcgcaaagaaagggaa
gcagagctgagagctaaagcaaacatatttaccaacgtttacatcaaaaattttggagat
gatgtagatgatgaatgtcttaaagaggtttttggtgagtttggttctgtattaagtgta
agagttatgactgatgaaagtggaaaatccaaagggtttggatttgtgaattttgagaat
tttgaagatgccaagaaagccattgaaaagatgaatggaaaagtccttaatggaaatcaa
atttatgttggtagagcccagaaaaaactagagagacaatctgaactaaaacataaattt
gaacaaataaaacagggtaaactcaccaagtgcaagggtgctaacctttatgtgaaaaat
cttgaagatgatattgatgacagacgactgagagaagaattctccctctttggcacaatc
tctagtgccagggtcatgatggaggcaggccacagcaaaggctttggttttgtttgttat
acatctcctgaggaagctaataaagctgtcatggcaatgaatggaaaaattgtgatcacc
aaaccactgtatgtggctattgcacaaagtaaggatgagcgccaggctttcctcaccaag
aactatatggaaagaatctcagctgtgagagatagagataatgctatactcaactatcaa
aagataacatcatccaataacttcataccaattcttcctcagtctcaatgtggcaatgta
catctttacaagcctgtggtaagggccaaatatcatccatctcagaatttacattatgct
acccactcagtagcagtgcctaagccatcaatcagcactttcatacagccacaagtgcca
ggggtcaagtcaacctatcaaatcaccaatatgacaaccccgaaaatggctgtttaccct
caaacttctgctttaagaccacctgcaaaccaaagattcaaaaaagttacagctattgca
aatgtctgcaggcctcttaaatttaaagtaggaaggccagcatccaaccagaagcctatc
cccgttggtcatgatatttcaaatgtgtctgtgttggcatcagctactactcagaagaat
atcttgggtgaaaagctggtacctctggttcaatccattcacccaactctggctggaaaa
atctctagaatactgttggagatggatgattctgaacttcttcatatgcttgagtctcca
gagtctctccgttctaaagttgatgaagctgtagttgtactacaagcccaccaagctaaa
gaggctgcccagaaagcagttaacagtaccactggtgttaaaactgtttaa
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