Neomonachus schauinslandi (Hawaiian monk seal): 110583450
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Entry
110583450 CDS
T08474
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03082
ATP-dependent chromatin remodeling
nsu04714
Thermogenesis
nsu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110583450 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110583450 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110583450 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsu03000
]
110583450 (ARID1B)
03021 Transcription machinery [BR:
nsu03021
]
110583450 (ARID1B)
03036 Chromosome and associated proteins [BR:
nsu03036
]
110583450 (ARID1B)
Transcription factors [BR:
nsu03000
]
Eukaryotic type
Helix-turn-helix
ARID
110583450 (ARID1B)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110583450 (ARID1B)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110583450 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
110583450
NCBI-ProteinID:
XP_044773447
EnsemblRapid:
ENSNSCG00000008089
UniProt:
A0A8M1MHY5
LinkDB
All DBs
Position
8:complement(10448732..10889388)
Genome browser
AA seq
2274 aa
AA seq
DB search
MAHNASTAAAAAAAASTNSAKSGGSEATLKEGGSAAALSSSSSAAAASSSSSSSGPGSAM
ETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHHALQQQLNQFQQQQQ
QQQQQQQQQQXXXXQQQQQQQQQQQQQQQQQHPISNNNSLGGAAQPGPDMEQPQHGGAKD
SAAGSQADPPGQPLLSKPGDEDDAPPKMGEPAGGRFEHPGLGALGAQQPPVAVPGGGGGG
GGGGGGPAAVSEFNNYYGSAAPASGGPGGRTGPCFDQHGGQQSPGMGMMHSASAAAGAPN
SMDPLQNSHEGYPNSQYNHYPGYSRPSAGGGGGGGGGGGGGGGSGGGGGGGGAGAGAGAV
AAAAAAAAAAAGGGGGGGGGYGGSSSGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGA
AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSSPSAPPPPSQPQSQAA
AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGS
PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPISIQGRTPGAMGGMQYP
QQQMPPQYGQQGVSYCQQGQQPYYNQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYG
TRSQPPLAPGKPNHEDLNLIQQERPSSLPVEVLTSEDTAFGLKDLSGSIDDLPTGTEATL
SSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP
ASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSP
HPSPGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGI
NANNQMHGQGPSQPCGAMPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMP
TVNRKAQEAAAAVMQAAANSAQSRQGTFPGMNQSGLMASSSPYSQPVNNSSGLMNTQAPP
YSMTPNMVNSSAASMGLADMMSPGESKLPIPLKADGKEEGTPQPESKSKKSSSSTTTGEK
ITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQV
NKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTAETKKQP
KLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSGTVSV
HDPFSDASDSSFPKRNSMTPSAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFM
TQGQMPTSSMQDMYNQSPSAAMSSLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPASGQP
PYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYSIQYGNQQQDVYNQYGGSYSGPDR
RPVQGQYPYPYNRERMQGPGQVQPHGIPPQMMGGPMQSSSSEGPQQSMWAARNDMPYPYQ
NRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSPASMQPITRPP
QSSYQTPPSLPNHISRAPSPASFQRSLESRMSPSKSPFLPSLKMQKVLPTVPTAQVTGPP
PQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALD
TINILLYDDSTVATFSLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAV
RRDDSQSLADDSGKEEEDAECIDEEDDEEDEDEDEDDGKTEMEEKSSAALASPNATADPK
EKPRQASKFDKLPIKIVKKNNLFVVDRSDRLGRVQEFNSGLLHWQLGGGDTTEHIQTHFE
SKMEIPPRRRPPPPVSSTGRKKEQEGKGEADEQQEKSIIATIDDVLSARPGALPEDANPG
APTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSL
SFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEDAEDKGVACSKDEWWWD
CLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSV
LSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALL
SNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLLHMQPPPLEPPSVDMM
CRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atggcccataacgcgagcacggcggccgccgccgccgccgccgccagcactaacagcgcc
aagagcggcggctccgaggcgactctcaaggagggtggaagcgccgccgcgctgtcctcc
tcctcctccgcggcggcggcgtcctcctcttcctcctcgtcgggcccgggctcggccatg
gagacggggctgctccccaaccacaaactgaaaaccgttggcgaagcccccgccgcaccg
ccccaccagcagcaccaccaccaccaccatgcccaccaccaccaccaccatgcccaccac
ctccaccaccaccaccacgcactacagcagcagctaaaccagttccagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcannnnnnnnnncagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcaacatcccatttccaacaacaacagcctc
ggcggcgcggctcagcccggtcccgacatggagcagccgcaacatggaggcgccaaggac
agtgccgcgggcagccaggccgaccccccgggccagcctctgctgagcaagccgggcgac
gaggacgacgcgccgcccaagatgggggagccggcgggcggccggttcgagcacccgggc
ctgggcgccctgggcgcgcagcagccgccggtcgccgtgcccgggggcggcggcggcggt
ggcggcggcggcggcggcccggcggccgtctcggagtttaataattactatggcagcgct
gcccctgctagcggcggccccggcggccgcactgggccttgctttgatcaacatggcgga
caacaaagccccgggatggggatgatgcactccgcctcagccgccgccggagcccccaac
agcatggaccccctgcagaactcccacgaagggtaccccaacagccagtacaaccattat
ccgggctacagccggcccagcgcgggcggcggcggcggcggcggcggcggcggcggagga
ggaggaggcagcggaggaggaggaggaggaggaggagcaggagcaggagcgggagctgtg
gcggcggcggccgcggcggcggcagcagcagcaggaggcggcggcggcggcggcggcggc
tatgggggctcgtcctcggggtacggggtgctgagctccccccggcagcagggcggcggc
atgatgatgggccccgggggcggcggggccgcgagcctcagcaaggcggccgccggcgcg
gcggctgggggcttccagcgcttcgccgggcagaaccagcacccgtcgggggccaccccg
accctcaaccagctgctcacctcgcccagccccatgatgaggagctacggcggcagctac
cccgactacagcagccccagcgcgccgccgccgccgtcgcagccccagtcccaggcggcg
gcagcggcggcgggggcggcggcgggcggccagcaggcggccgcgggcatgggcttgggc
aaggacatgggcgcccagtacgccgctgccagcccggcctgggcggccgcgcaacaaagg
agccacccggcgatgagccccggcacccccggcccgaccatgggcagatcccagggcagc
ccaatggatcctatggtgatgaagagacctcagttgtatgggatgggcagtaaccctcat
tctcagcctcagcagagcagcccttacccaggaggctcctacggccccccaggcccacag
cggtatccaatcagcatccagggtcggaccccaggggccatgggaggaatgcagtaccca
cagcagcagatgccacctcagtatggacagcaaggtgtgagttactgtcagcagggccag
cagccttactacaaccagcagccgcagcctccgcacctccctccgcaggcccagtacctg
ccgtcccagtcccagcaaaggtaccagccgcagcaggacatgtctcaggaaggctatgga
actaggtctcaacctcctttggctcctggaaaacctaaccatgaagacttgaacttaata
caacaagaaagaccatcaagtttaccagttgaagtcttgacctcggaggataccgccttt
ggactcaaggacctgtctggctccatcgatgacctccccacgggaacggaggcaactctg
agctcagcagtcagtgcgtctgggtccacgagcagccaaggggatcagagcaacccagct
cagtcacctttctctccgcacgcatcaccccatctctccagcatccctgggggcccatcg
ccttctcctgtcggctctcctgtgggcagcaaccagtcgcgatctggcccgatttctcct
gcaagtattccaggcagtcagatgcctcctcagccacctggaagccagtcagaatccagt
tcccatcctgccttgagccagtcaccaatgccacaggaaagaggttttatggcaggcaca
caaagaaaccctcagatgtctcagtatggacctcaacagacaggaccatccatgtcgcct
catccttctcctggaggccagatgcatcctggaatcagtagctttcagcagagtaactca
agtgggacttatggtccacagatgagccagtatggaccacaaggtaactactccagaccc
ccaacgtatagcggggtgcccagtgcaagctacagcggcccagggcccggcatgggcatc
aatgccaacaaccagatgcatggacaagggccaagccagccatgtggtgctatgcccctg
ggacgaatgccatcagctgggatgcagaacagaccatttcctggaaatatgagcagcatg
acccccagctctcccggcatgtctcagcagggagggccaggcatggggccaccgatgcca
accgtgaaccgtaaggcacaggaggcagccgccgcagtgatgcaggccgctgcaaactcg
gcacagagcaggcaaggcacttttccgggcatgaatcagagtggacttatggcttccagc
tctccctacagccagcccgtgaacaacagctctgggctgatgaacacccaggcacccccc
tacagcatgacgcccaatatggtgaacagctcagcagcatctatgggtcttgcagatatg
atgtctcccggggaatccaaattgcccatacctctcaaagccgacggtaaagaagaaggc
actccgcagcctgagagcaagtcgaagaagtccagctcatccaccaccactggggaaaag
atcacaaaggtgtatgagttggggaatgagccagagagaaagctgtgggtcgacagatac
cttaccttcatggaagagaggggctcgcctgtctcgagtctgcccgccgtgggcaagaag
cccttggacctgttccggctctacgtctgtgtcaaggagattggaggtttggcacaggtc
aataaaaacaagaagtggcgtgagctggcaaccaacctaaatgttggcacttcaagcagc
gcagcgagctccctgaaaaagcagtatattcagtacctgttcgcctttgagtgcaagata
gaacgcggggaggagcccccgccggaagtctttagcacggcggaaaccaagaagcagccc
aagctccagccgccctctcctgctaactcaggatccttgcaaggtccacagaccccccag
tcaactggcagtaactcgatggcagaggtcccaggtgacctgaagcccccgaccccagcc
tccacccctcatggacagatgaccccgatgcaaggtggaagaagcggtacagtcagcgtg
cacgacccattctcagacgccagtgattcatcattcccgaaacggaactccatgactccg
agcgccccctaccagcagggcatgagcatgcccgacgtgatgggaaggatgccctatgaa
cccaacaaggacccctttggtggaatgagaaaagtgcctggaagtagtgagccctttatg
actcaagggcagatgcccacgagcagtatgcaggacatgtataaccagagtccctctgca
gcgatgtccagtctgggcatggggcagcggcagcagtttccctacggagccagctacgat
cgaaggcatgaaccttacgggcagcagtacccaggccaaggccctgcctcaggacagccg
ccatatggaggacaccagcccggcctgtatccacagcagccgaattacaaacgccatatg
gacggcatgtacgggcctccagccaaacgccacgagggagacatgtacagcatacagtac
ggcaaccagcagcaagacgtgtataaccagtatgggggctcttactccggaccggacagg
aggcccgtccaggggcagtacccgtatccctacaacagggagcggatgcagggcccgggg
caggtacagccgcatgggatcccgcctcagatgatgggcggcccgatgcagtcgtcctcc
agcgaagggcctcagcagagcatgtgggcggctcgcaacgatatgccttacccctaccag
aacaggcaaggcccgggcggccccgcccaggcacctccttaccccggcatgaaccgcacg
gatgatatgatggtacctgatcaaaggatcaatcacgagagccagtggccttctcacgtc
agccaacgtcagccttatatgtcctctcctgcctccatgcagcccatcacgcgcccgcct
cagtcatcctaccagacgccaccatcgctgccaaatcacatctccagagcccccagccct
gcctccttccagcgctccctggagagccgcatgtctcccagcaagtctccctttctgccc
tccctgaagatgcagaaggtcctgcccaccgtccccacggcccaggtcacagggccgccc
ccccagccgccccccatcagaagggagattacctttcctcctggctccgtcgaggcctca
cagccagttttgaaacaaaggcgaaagattacctcaaaagatatcgttactcctgaggcc
tggcgtgtgatgatgtcccttaagtcaggtcttctggctgaaagtacttgggctctggac
actattaacattctcctgtatgatgacagcactgtcgctaccttcagtctctcgcagttg
tctggatttctcgaacttttagtagagtactttagaaaatgcctaattgacatttttggg
attcttatggaatatgaggtgggagaccccagccaaaaagcacttgatcacaatgcagtg
aggagagatgacagccagtcgttggctgacgactcggggaaagaggaggaagatgctgag
tgtattgacgaggaggacgacgaggaggatgaggacgaggacgaggacgatgggaagacg
gagatggaggagaagagcagcgcggctctggcctctcccaacgccactgcagatcccaag
gagaagcccaggcaagcgagtaagttcgacaagctgccaataaagatagtcaaaaagaac
aacctgttcgtggtcgaccggtctgacaggctgggtcgtgttcaagagttcaacagtgga
cttctgcactggcagcttggtgggggggacaccaccgagcacatccagactcacttcgag
agcaagatggagatccctcctcggaggcgtccacctccccctgtaagctccactggtagg
aagaaagagcaagaaggaaaaggcgaggctgacgagcagcaagagaaaagcatcatcgcg
accattgacgacgtcctgtctgcgcggccaggggcgctgccggaagacgcaaaccctggt
gccccaaccgaaagcagtaagtttccctttgggatccatcaagccaaaagtcaccggaac
atcaagctgctggaggacgagccaaggagccgagacgagactcctctctgcaccattgcg
cactggcaggattctctggctaagcgctgtatctgtgtgtccaacattgtccgcagcttg
tcttttgtgcctggtaatgacgctgaaatgtccaaacatccaggcttggtgctgatcctg
gggaagctgattctgcttcaccacgagcatccagagaggaagcgagcgccgcagacctac
gagaaggaggacgccgaggacaaaggggtggcctgcagcaaggatgagtggtggtgggac
tgccttgaggtcttacgggataacacgctggtcacgttggccaacatttctgggcagcta
gacttgtctgcttacacagaaagcatctgcttgccaatcttggatggcttgctgcactgg
atggtgtgcccgtctgcagaggcacaagaccccttccccactgtgggacccaactccgtc
ctgtcgcctcagagactcgtgctggagaccctctgcaaactcagcatccaggacaataac
gtggacctgatcttggccacgcctccatttagccgccaggagaaattctatgctacgtta
gttaggtacgtgggggatcggaaaaacccagtctgtagagagatgtccatggcgctctta
tcgaaccttgcccaaggggacgccctggcagcgagggccatagctgtgcagaaggggagc
attggcaacttgataagcttcctagaggacggggtcaccatggcccagtatcagcagagc
cagcataacctcctgcacatgcagcccccgcctctagaacccccgagcgtggacatgatg
tgcagggcggccaaggctctgctggccatggccagggtggacgagaaccgctcggagttc
ctcctgcacgagggccgattgctggatatctcgatatcagccgtcctgaactctctggtt
gcgtctgtcatctgtgatgtactgtttcagatcgggcagttatga
DBGET
integrated database retrieval system
