Neomonachus schauinslandi (Hawaiian monk seal): 110584333
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Entry
110584333 CDS
T08474
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03082
ATP-dependent chromatin remodeling
nsu04714
Thermogenesis
nsu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110584333 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110584333 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110584333 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsu03021
]
110584333 (SMARCA2)
03036 Chromosome and associated proteins [BR:
nsu03036
]
110584333 (SMARCA2)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110584333 (SMARCA2)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
110584333 (SMARCA2)
Chromatin remodeling factors
BAF complex
110584333 (SMARCA2)
PBAF complex
110584333 (SMARCA2)
GBAF(ncBAF) complex
110584333 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
110584333
NCBI-ProteinID:
XP_044776645
UniProt:
A0A8M1MTW2
LinkDB
All DBs
Position
13:complement(9053760..9241102)
Genome browser
AA seq
1567 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSADFPQEGIHQMHKPIDGLHDKGIVEDIHCGSMKGSSMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPLSGGGPTPPQMPPSQPGPLISGDPQAMSQPSRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQAPQPQPQAQQPQQQALVNYNRPS
GPGPELSGPSTPQKLPVPAPSGRPSPAPAAAAQPPAAAVPGPSVAQPAPGQPSPILQLQQ
KQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKAL
RLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERK
RRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERM
RRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRK
KKAEEIAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEM
NPGYEVAPRSDSEESDSDYEEEDEEEESSRQDTEEKILLDPNSEEVSEKDAKQIIETAKQ
DVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNL
NGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKIS
YKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKL
TQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGER
VDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQA
KGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGA
ELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSE
DRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRI
GQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEH
EEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSW
IIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRL
KKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNV
EKVPGNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS
LGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDDSNEEEEEE
DEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDENEQSE
ASGTDDE
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggcgcgatgccccatccagggccttcgccggggcccgga
ccctcacccggacccattcttggacctagtccaggacccgggccatccccaggttctgtg
cacagtatgatggggccgagccctggacctcccagtgtctcacaccctatgccgacaatg
gggtctgccgacttcccgcaggaaggcatacaccaaatgcataagcccatcgatggtctg
catgacaaggggattgtggaagatatccattgtggatccatgaagggctccagtatgcgg
ccacctcacccaggaatgggtcctccccagagtccgatggatcaacacagccaaggttac
atgtcgccacacccgtctccgctgggagcccccgagcacgtctccagccctctgtcgggg
ggcggcccgaccccaccccagatgccgccgagccagccggggcccctcatctcaggcgac
ccgcaggcgatgagccagcccagcagaggtccctcgcctttcagccccgtccagctgcat
cagctgcgagcgcagattttagcttacaaaatgctggcccggggccagcccctccccgaa
acactgcagcttgcagtccaggggaaaaggacgttgcccggcatgcagcaggccccacag
ccccagccacaggcacagcagccgcagcagcaggcccttgttaactacaacagaccatct
ggcccggggccggagctgagcggcccgagcaccccgcagaagctgccggtgcccgcgccc
agcggccggccctcgcccgcccccgccgccgccgcgcagccgcccgcggccgccgtgccc
gggccctccgtggcgcagccggccccggggcagccctcgcccatcctgcagctgcagcag
aagcagagccgcatcagccccatccagaaaccgcaaggcctggacccggtggagatcctg
caggagcgcgagtacaggctccaggctcgcatagctcataggatacaagaactggaaaat
ctgcctggctctttgccaccagatttacgaaccaaagcaaccgtggaactgaaagcactt
cggttactcaatttccagcgtcagctgagacaggaggtggtggcctgcatgcgacgggac
accacgctggagacggccctcaactccaaagcctacaaacggagtaagcgccagacgctg
cgggaggcccgcatgacggagaaactggagaagcaacagaagatcgagcaggagaggaag
cgtcggcagaagcaccaggaatacctgaacagcattttgcagcatgcaaaagattttaag
gagtaccatcggtctgtggccgggaagatccagaagctatccaaagcagtggcaacttgg
catgccaacaccgaaagagaacagaaaaaagagacggagcggatcgaaaaggagagaatg
cggaggctgatggctgaagatgaagaaggctacagaaaactgatcgatcaaaagaaagat
aggcgtttagcttacctcctgcagcagaccgatgagtatgtggccaacctgaccaacctg
gtgtgggagcacaagcaagcccaagctgccaaagagaagaagaagaggaggaggaggaag
aagaaggctgaagagattgccgagggaggagagtctgccctgggaccagatggagagccc
atagatgaaagcagtcagatgagtgacctgcccgtcaaagtgactcacacagaaactggc
aaggtcctctttggaccagaagcacccaaagcaagtcagctggacgcctggttggaaatg
aatcccggttacgaagttgccccccgatctgacagtgaagagagcgattctgattacgag
gaggaggatgaagaagaagagtccagtcggcaggacacggaagagaaaatacttctggat
ccaaacagcgaagaggtttctgaaaaggacgccaagcagatcattgagacagccaagcag
gacgtggacgatgagtacagcatgcagtacagcgccaggggctcccagtcctactacacg
gtggcccacgccatctctgagcgggtagagaagcagtcggccctcctcattaatgggacc
ctgaagcattatcagctccagggcctggaatggatggtttccctgtataataacaatttg
aacgggatcttagcggatgaaatggggctagggaagaccatacagaccattgcactcatc
acttatctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctttcg
actctgtctaactggacatatgaatttgacaaatgggctccttctgtggtgaaaatttct
tacaagggcacccctgccatgcgtcgctcccttgtcccccagctgcggagtggtaaattc
aatgtcctcctgactacttatgagtacattatcaaagacaagcacattcttgcaaagatt
cggtggaaatacatgatcgtggatgaaggccaccgaatgaagaatcaccactgcaagctg
actcaggtgttgaacactcactatgtggcccccagaaggatcctcttgactgggaccccg
ctgcagaataagctcccagaactctgggccctccttaacttcctcctccccaccattttc
aagagttgcagcacatttgaacagtggtttaacgctccatttgccatgactggagaaagg
gtggacttaaatgaagaagaaactatattgatcatcaggcgtctacataaggtgttgaga
ccatttttactgaggaggctgaagaaagaagttgagtcccaattgccagaaaaagttgaa
tatgtgatcaagtgtgatatgtccgcgctgcagaaaattctctatcgccacatgcaagcc
aaagggatcctcctcaccgatggctcggagaaagataagaagggaaagggaggtgctaag
actctcatgaacactatcatgcagttgagaaaaatctgcaaccacccctatatgtttcag
cacattgaggaatcctttgctgaacacctgggctattcaaatggggtcatcaatggggct
gagctgtatcgggcctcaggaaagtttgagctgcttgatcgtattctgccaaaactgaga
gcaactaatcaccgcgtgctgcttttctgccagatgacgtccctcatgaccatcatggag
gattactttgcatttcggaacttcctgtaccttcgccttgatggcaccaccaagtctgag
gaccgggctgctttgctgaagaaattcaacgagcccgggtcccagtatttcatcttcttg
ctgagcaccagggctggtggcctgggcttgaaccttcaggcagctgatacagtggtcatc
tttgacagcgactggaaccctcaccaggatctgcaagcacaggaccgagctcaccgcatc
ggccagcagaacgaggtccgggtgctgagactgtgcaccgtaaacagcgtggaggaaaag
attctcgccgccgcaaagtacaagctaaacgtagatcagaaagtgatccaggcgggcatg
tttgatcagaagtcttcgagccacgagcggagggcattcctgcaggccatcctggagcac
gaagaggaaaatgaggaagaagatgaagtgccggacgacgagactctgaaccaaatgatt
gctcgacgagaagaagaatttgatctcttcatgcgtatggacatggaccggcggagggag
gatgcccggaacccgaagcgtaagccccgcttaatggaggaagatgagctgccctcctgg
attattaaggatgacgccgaagtagaacggctcacgtgtgaagaagaggaggagaagata
tttggcagggggtctcgccagcgccgggacgtggactacagcgacgccctcacggagaag
cagtggctgagggccattgaagacggcaatttggaagaaatggaagaggaagtacggctc
aagaagcgaaaaagacgaagaaatgtggataaagatcctgcaaaagaagacgtggagaag
gccaagaagagaagaggccgccctccagctgagaaactatccccaaatccccccaaactg
acgaagcagatgaacgccatcatcgatactgtgataaactataaggacaggtgtaacgtg
gagaaggtgcccggtaattctcagttggaaatagaaggaaacagttcagggcggcagctc
agtgaagtcttcattcagttaccttcaaggaaagaattgccagaatattatgaattaatt
aggaagccggtggatttcaaaaaaataaaggaaagaattcgtaatcacaagtaccggagc
ctgggtgacctggagaaggatgtcatgcttctctgtcacaatgctcagacgttcaacttg
gagggatcccagatctacgaagactcgatcgtcttacagtccgtgtttaagagtgctcgg
cagaaaatcgccaaagaggaagagagtgaggacgacagcaacgaggaggaggaggaggag
gatgaggaggagtccgagtcagaggcaaaatctgttaaggtgaaaatcaagctcaataaa
aaagacgagaaaggccgggacaaaggcaaaggcaagaaaaggccgaatcggggaaaagcc
aagcctgtagtgagtgatttcgacagtgatgaggagcaggatgaaaatgaacagtcagaa
gcaagtgggactgatgatgagtga
DBGET
integrated database retrieval system
