Neomonachus schauinslandi (Hawaiian monk seal): 110584755
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Entry
110584755 CDS
T08474
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsu04121
]
110584755 (PDZRN3)
Enzymes [BR:
nsu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110584755 (PDZRN3)
Ubiquitin system [BR:
nsu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
110584755 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
110584755
NCBI-ProteinID:
XP_021550573
UniProt:
A0A2Y9HFM3
LinkDB
All DBs
Position
1:174631853..174872037
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AA seq
1066 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCSRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNAALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCMDNQDGSSTEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPTPPVLDPYLLPEEHPSAHEYYDPSDYIGGVHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDHLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSTPL
AGQRKLTCSQDTLGSGDLPFSNESFLSADCTDADYLGIPVDECERFRELLELKCQAKSSS
PYSLYYASSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLREQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RVAEGSSCAGSEGAAGSMEAYRPAPKNLLSITEDPEVGSASYSPPPPPRELEAGPAPESR
ERRPSDDSGSPGPKLGGSYLPPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQM
SLVSMCKDLTSAGQAEARMEWKVKVRSDGTRYITKRPVRDRLLRERALKIREERSGMTTD
DDAVSELKLGRYWSREERKQHVVRAKEQKRRREFMMQSRLDCLKEQQAADDRKEMNILEL
SHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcactg
tgccacaaggtcttggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgttgccttgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgtctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcagccgagtggtcaagctgcagcagctgcccgag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgttgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaagagggctgcgggctgcccctgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgggccctgcgggcgcacaacgcggcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgcgggcaagcgcgagaagtcgctggtggcg
cagctggccgcggcgcagctggagctgcagatgaccgccctgcgctaccaaaagaagttc
accgagtacagcgcgcgtctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggtgaagaaaccaaaagtctgactcttgtcctacatcgggactctggctccctggga
ttcaatattattggtggccggccgtgtatggacaaccaagatggatcgtccactgaagga
atctttgtatccaaaatagttgacagtgggcccgcagccaaggacggaggcctgcaaatt
catgacaggattattgaggtcaacggtaaagacttatccagagcgactcatgaccaggct
gtggaagctttcaagaccgccaaagagcccattgtggtgcaggtgttgaggagaacgcct
cgaaccaaaatgttcacacctccgtcagagtcgcagctggtggacacgggaactcaaacc
gacatcaccttcgagcacatcatggcgctcaccaagatgtcctctcccaccccgcctgtg
ctggatccctatctcctgccagaggagcacccctcggcccacgagtactatgaccccagt
gactacattggaggtgtccatcaggaaatggacagggaggaactggagttggaggaagtg
gatctctacagaatgaacagccaggacaagctgggcctcaccgtgtgctaccggactgat
gatgaagatgacattgggatttacataagtgagatcgaccctaacagcattgcggccaag
gacgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtacagaac
cgtgaagaggccgtggctctcctaaccagtgaagaaaacaagaacttttccttgctgatt
gcaaggcccgaactacagctggacgagggctggatggacgacgaccgaaacgactttctg
gaccacctgcacatggacatgctggaggagcagcaccaccaggccatgcagttcactgcc
agcgtgctgcagcagaagaagcatgaagaagacggggggaccacagatacagccaccatc
ctgtccaaccagcacgagaaggacagcggcgtgggacgcacggacgagagcacgcgcaat
gacgagagctcggagcaagagaacaacggggacgatgccaccgcgtcatccaccccgctg
gccgggcaaaggaagctcacgtgcagccaggacaccctcggcagcggcgacctgccgttc
agcaacgagtccttcctgtcggccgactgcactgacgctgactacctgggcatccccgtg
gacgagtgcgagcggttccgggagctcctggagctcaagtgccaggccaagagcagcagc
ccctacagcctgtactacgccagcagccccctggatgccagcaagagcgaccctgagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgggcgcacaagatgcagcagctccgggagcagtaccgtgagtcgtggatg
ctgcacaacagtggcttccgcaactacaacaccagcatcgacgtccgcaggcacgagctg
tcggacatcaccgagctccccgagaagtccgacaaagacagctcgagcgcctacaacacg
ggcgagagctgccgcagcaccccactcaccctggaaatgtcccccgacaactccctgagg
agagtggcagagggcagcagctgcgcaggcagcgagggggccgcggggagcatggaagcc
tacaggccagcccccaagaacctgctctccatcacggaagacccggaggtgggcagcgcc
agctacagcccgccgcctcctcctcgagagctggaggctggcccagccccggaaagcagg
gagcggaggcccagcgacgacagcgggagccccggccccaagctgggcggctcctacctg
ccgcccttcccgcactcgccctacaaacacgcccacatcccggcgcacgcgcagcactac
cagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcagagccagatg
agcctggtgagcatgtgcaaggacctgacctcggccggccaggcggaagccaggatggag
tggaaagtgaaggtccgcagcgacggcacgcgctacatcaccaagcggccggtgcgggac
cgcctgctgcgcgagcgcgcgctcaagatccgcgaggagcgcagcggcatgaccaccgat
gacgacgcggtgagcgagctgaagctggggcgctactggagcagagaggagaggaagcag
cacgtggtgagggccaaggagcagaagcgcaggcgcgagttcatgatgcagagccggctg
gattgcctgaaggagcagcaagccgccgacgacaggaaggagatgaacatccttgaactg
agccacaaaaagatgatgaagaagaggaacaaaaagatatttgacaattggatgacaatc
caagaactcttaacccacggcacaaagtcaccagatggcacgagagtatacaattccttc
ttatccgtgactactgtataa
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integrated database retrieval system
