Neomonachus schauinslandi (Hawaiian monk seal): 110585257
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Entry
110585257 CDS
T08474
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04140
Autophagy - animal
nsu04148
Efferocytosis
nsu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110585257 (VPS18)
04148 Efferocytosis
110585257 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110585257 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsu04131
]
110585257 (VPS18)
Membrane trafficking [BR:
nsu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110585257 (VPS18)
Hops complex
110585257 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110585257
NCBI-ProteinID:
XP_021551134
UniProt:
A0A2Y9HNE1
LinkDB
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Position
9:81887766..81896334
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGFVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAAEGAE
AQGFAGLFAAYTDHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLALVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLAGL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALNLYRETRERFRSFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEDDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPAPTKGSARTKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatacgaggactccctgtcccgctcagccgtcttgcagcct
ggctgccccagcgtgggcatcccccactccgggtttgtgaatgcccagctagagaaggaa
gtgcccatcttcacgaagcagcgcattgactttaccccttctgagcgaattaccagtctt
gtcgtttcctgcaatcagctctgcatgagcctggggaaggatacactactccgcattgac
ttgggcaaggcaaatgaacccaaccacgtggagctggggcgcaaggatgatgccaaggtt
cacaagatgtttctggaccacactggctctcacctgctgattgctctgagcagcactgag
gtcctctatgtgaaccgtaatggacagaaggtccggccactggcacgctggaaggggcag
ctggtggagagtgtgggctggaacaaggcattgggcaccgagagcagcactggccccatc
ctggtcggcaccgcccaaggccagatcttcgaagcagagctctcagccagcgagggtggg
ctttttggccccgccccagatctctacttccgcccattgtatgtactaaacgaagaaggg
ggtccagcacctgtgtgctccctcgaggccgagcggggccctgacgggcgtggctttgtt
atcgccaccacccggcagcgcctcttccagttcataggtcgagcagcagagggggctgag
gcccagggcttcgcggggctcttcgctgcctacaccgaccacccacccccattccgtgag
ttccccagcagtctgggctacagtgagttggccttctatacccccaagttgcgctccgca
cctcgggccttcgcctggatgatgggggatggcgtgttgtacggagcattggactgcggg
cgtcccgattccctgctgagcgaggagcgagtctgggagtacccagagggggtaggtccg
ggggccagcccacccctggctctcgtcctgacccagttccacttcctgctgctgctggcg
gaccgggtggaggcagtgtgcacgctgacggggcaggtggtgctgcgggatcacttcctg
gagaagtttgggcccctgaagcacatggtgaaggactcttccacgggccacctgtgggcc
tacactgagcgtgccgtcttccgctaccacgtgcagcgggaagcccgggatgtctggcgc
acctacctggacatgaaccgcttcgacctggccaaagagtattgtcgagagcggcctgac
tgcctggacacagtcctggcccgggaggccgatttctgctttcgccagcgtcgttacctg
gagagcgcccgctgctacgccctgacccagagctactttgaggagattgccctcaagttc
ttggaggcccgacaggaggaggctctggctgagttcttgcagcgaaaactggccggtttg
aagccagccgagcgcacccaggccacactgcttaccacctggctgacggagctttacctg
agccggctcggagcactgcagggtgatcccgaggccctgaacttgtaccgggaaacacgg
gagcgcttccggtccttcctcagcagcccccgccacaaggagtggctctttgccagccgg
gcctccatccacgaactgctcgccagccacggggacacagaacacatggtgtacttcgcc
gtgatcatgcaggactacgagcgcgtggtggcgtaccactgccagcatgaggcctatgag
gaagccctggcagtgcttgctcgccaccgtgacccccagctcttctataagttctcgccc
atcctcattcgtcacatcccccgccagctggtggatgcttggattgagctgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactatagccagggtggcgaagcccag
caggtgagccaggccatccgctacatggaattctgcgtgaatgtgctcggcgagacggag
caggcgattcacaattacctgctgtcgctatatgcccggggccagccggcctcactgctg
gcctaccttgagcaggccggcgccagcccgcaccgcgtgcattacgacctcaagtatgcg
ctgcgtctctgtgctgagcacggccaccaccgtgcctgtgtccatgtctataaggtccta
gagctgtacgaggaggctgtggacctggccctgcaggtggacgtggacctggccaaacag
tgtgctgacttgcccgaggacgacgaggaactgcgtaagaagctgtggctgaagattgct
cggcacgtggtgcaggaggaggaggacgtgcagacggccatggcctgcctggccagctgc
cccctgctgaagatcgaggatgtgctgcccttctttcctgacttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcgctcaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggccacggccagcgctcagcgcatccggcgagacctgcaggagctg
cggggccgctacggcacggtggagccacaggacaagtgtgccacctgtgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccacatgttccatgctgactgcttgctg
caggccgtgcggcctggcctgccggcctacaagcaggcccggctcgaggagctgcagcgg
aagttgggggctgctccggcccctaccaagggctctgcccgcaccaaggaggccgaaggt
ggggctgccacggcggggcccagtcgggaacagctcaaggctgatctcgatgaactggtg
gccgccgagtgcgtgtactgtggggagctgatgatccgctccattgaccggcccttcatt
gacccccagcgctatgaggaggagcacctcagttggctgtag
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