Neomonachus schauinslandi (Hawaiian monk seal): 110586229
Help
Entry
110586229 CDS
T08474
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nsu04515
]
110586229 (DSCAML1)
Cell adhesion molecules [BR:
nsu04515
]
Immunoglobulin superfamily
DSCAM family
110586229 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
C2-set_3
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
110586229
NCBI-ProteinID:
XP_021552095
UniProt:
A0A2Y9HRQ5
LinkDB
All DBs
Position
11:96982222..97305005
Genome browser
AA seq
1917 aa
AA seq
DB search
MRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITHHGGLYISDVQKEDALSTY
RCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAGHTVELPCTASGYPIPA
IRWLKDGRPLPADSRWTKRITGLTISDLRTEDSGTYICEVTNTFGSAEATGTLTVIDPLH
VTLTPKKLKTGIGSTVILSCALLGSPEFTIRWYRNTELVLPDEAVSIRGLSNETLLITSA
QKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPP
PTVTWALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNSVGSAEY
QARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFEN
GTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASIGQLLYIP
CVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAA
TVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGSPQQYH
PVPLTGRTQILANSSLLIRHVLEEDMGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPN
TTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAITTKDNGDEVVSTLKLKP
ADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSI
ITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKE
LTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQ
YSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPEN
VRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRERVELRG
MEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPAK
PNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNS
SEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSM
DGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSA
SSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSGERSFKLDSLKCGTWYKVKLA
AKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLE
YRPKGTWAWQGLRANSSGEVFLTELREATWYELRMRACNSAGCGNETAQFATLDYDGSTI
PPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKRLKRLRDAKSLAEMLIS
KNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDAEFSQAVNPQ
SFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKSVKAAHSTRNRYSSQWTLTKCQAS
TPARTLASDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYE
HAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEPGICRFTASPPKP
QDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKADGREPCPVVPPREASVRNLART
YHTQARHLTLDPASKPLGLPHPGGPAAAATATLPQRTLAMPAPPAGTAPPAPGPTPAEPP
AAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQGAGAYSKSYTLV
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaaacgtggccgtcttcaagtgcctcatcccctcttcagtgcaggaatatgtt
agcgttgtgtcctgggagaaggacacggtctccatcatcccagaaaacaggttttttatt
actcaccacggcgggctgtacatctctgacgtgcagaaggaggatgccctctccacctac
cgctgcatcaccaagcacaagtatagtggggagacccggcagagcaatggggcccgcctc
tccgtaacagaccctgccgagtcgatccccaccatcctggatggcttccactcccaggaa
gtgtgggcgggccacaccgtggagctgccctgcaccgcctccggctaccccatccctgcc
atccgctggctcaaggacggccggcccctcccggccgacagccgctggaccaagcgcatc
accgggctgaccatcagtgacctgcggacggaggacagtggcacctacatttgtgaggtc
accaacaccttcggctctgcagaggccacgggtaccctcacagtcattgacccccttcac
gtgaccctgacaccaaagaagctgaagaccgggatcggcagcacagtcatcctctcctgt
gccctgctgggctccccggaattcaccatccgctggtatcgcaacactgagctggtgctg
cccgacgaggccgtctccatccgcgggctcagcaacgagactctgctcatcacctcggcc
cagaagagccactccggggcctaccaatgctttgccacccgcaaggcccagaccgcgcag
gacttcgccatcattgtgctggaggatggcacgccccgcatcgtctcgtccttcagcgag
aaggtggtcaaccccggggagcagttctcgctgatgtgtgcggccaagggcgccccgccc
cccactgtcacctgggccctggacgacgagcccatcgtgcgggatgggagccaccgcacc
aaccagtacaccatgtcggacggcaccaccatcagccacatgaacgtcacgggcccccag
atccgcgacgggggcgtataccgatgcacggcgcggaactcggtgggcagtgctgaatat
caggcgcgaataaacgtaagaggcccccccagcatccgggcgatgaggaacatcaccgct
gtcgccgggcgggacaccctcatcaactgcagggtcatcggctacccctactactccatc
aagtggtataaggacgccctgctgctgcccgacaaccaccggcaggtggtgttcgagaac
gggacgctgaagctgaccgacgtgcagaagggcatggatgagggggagtacctgtgcagc
gtcctcatccagccccagctgtccatcagccagagcgtccacgtggctgtcaaagtgccc
cctctaatccagccctttgagttcccacccgcctccatcggccaactgctctatatcccc
tgcgtggtgtcctcgggggacatgcccatccgcatcacctggaggaaggatggacaggtg
atcatctcaggctcgggcgtgaccatcgagagcaaggaattcatgagctccctgcagatc
tccagcgtctccctcaagcacaacggcaactacacgtgcatcgccagcaacgcagcggcc
accgtgagccgggagcgccagctcatcgtgcgtgtgcccccacgatttgtggtgcagccc
aacaaccaggacggcatctacggcaaagctggcgtgctcaactgctcagtggatggctac
cccccgcccaaggtcatgtggaagcatgccaaggggagcgggagcccacagcagtaccac
ccggtacctctcaccggccgcacccagatcctggccaacagctcgctgctgatccgccac
gtcctggaagaggacatgggctactacctctgccaggccagcaacggcgtgggcaccgac
atcagcaagtccatgttcctcaccgtcaagatcccagccatgatcacctcccaccccaac
accaccatcgccatcaagggtcacgcgaaggagctcaactgcacagcgcggggtgagcgg
cccatcatcatccgctgggagaagggggacacggttatcgaccctgaccgagtcatgcgg
tacgccatcaccaccaaggacaacggcgacgaggttgtctccacgttgaagctcaagcca
gctgaccgtggggactctgtgttcttcagctgccatgccatcaactcatatggggaggac
cggggcttgatccaactcactgtgcaagagccccctgaccccccagagctggagatccgg
gaggtgaaggcccggagcatgaacctgcgctggacccagcgattcgacgggaacagcatc
atcacgggcttcgacattgaatacaagaacaaatcagattcctgggacttcaagcagtcc
acacgcaacatctcccccaccatcaaccaggccaacatcgtggacttgcacccagcatct
gtgtacagtatccgcatgtactccttcaacaagattggccgcagcgagccgagcaaagag
ctcaccatcagcaccgaggaggctgctcccgatgggccccccatggatgtcaccttgcag
ccagtaacctcacagagtatccaagtgacctggaaggcgcccaagaaggagctgcagaat
ggcgtcatacggggctaccagattggctacagggagaacagccctggcagcaacggacag
tatagcatcgtggagatgaaagccactggggacagtgaggtctacaccctggacaacctc
aagaagttcgcccaatatggggtggtggtccaggccttcaatcgggctggcacagggccc
tcatccagcgagatcaatgccaccaccctggaggacgtgcccagccagccccccgagaat
gtccgggccctgtccatcacctccgatgtggctgtcatctcctggtcggagcccccacgc
agcacgctcaatggagtcctcaaaggctatcgggtcatcttctggtcactctatgtggat
ggggagtggggcgagatgcagaacatcaccaccacgcgggagcgggtagagctgcgaggt
atggagaagttcaccaactacagcgtgcaggtgctggcctacacccaagccggggacggc
gtgcgcagcagcgtgctctacatccagaccaaggaggatgttccaggtccccctgctggc
atcaaagctgtcccttcctccgccagcagtgtggtcgtgtcttggctcccgccagccaag
cccaatggggtgatccgcaagtacaccatcttctgctccagccctgggtctggccagccg
gctcccagcgagtacgagacgagtccggagcagctcttctaccggatcgcccacctaaac
cgtgggcagcagtatttgctgtgggtggctgctgtcacctctgccggccggggcaacagc
agcgagaaggtcaccattgagcccgcaggcaaggccccagcaaagatcatctcatttgga
ggcaccgtgacaaccccctggatgaaagatgtccgactgccttgcaattcggtgggagat
ccagcccctgctgtgaagtggaccaaggacagtgaagactcagccatccccgtgtccatg
gatgggcaccggctcatccataccaatggcacgctgctgctgcgtgctgtgaaggctgag
gactcgggctactacacctgcacggccaccaacactgggggcttcgacaccatcatcgtc
aaccttctggtgcaagttcccccggaccagccccgcctcactgtctctaaaacctccgct
tcgtccatcaccctgacctggattccaggtgacaatgggggcagctccatccgaggcttc
gtgctgcagtactcggtagacaacagcgaggaatggaaggacgtgttcatcagctcaggc
gagcggtccttcaagctggacagcctcaagtgtggcacgtggtacaaggtgaaactggca
gccaagaacagcgtgggctccgggcgcatcagcgagatcatcgaggccaagacccacggg
cgggagccctccttcagcaaagaccagcacctgttcacccacatcaactccacgcatgct
cggcttaacctgcagggctggaacaacgggggctgccccatcacagccatcgtgctggag
taccggcccaagggcacctgggcctggcaggggctgcgggccaacagctctggggaggtg
tttctgaccgagctgcgcgaggccacgtggtacgagctgcgcatgcgggcttgcaacagc
gctggctgcggcaacgagactgcccagttcgccaccctggactatgacggcagtaccatc
cctcccatcaagtctgctcaaggggagggggatgatgtgaagaagctgttcaccatcggc
tgcccggtcatcctggccactctgggggtggcactgctcttcatcgttcgcaagaagagg
aaggagaagcggctgaagcgtctccgagatgcaaagagtctggcagaaatgttgataagt
aagaacaaccgaagttttgacacccctgtgaaggggccacctcagggcccgaggctacac
attgacatccccagagtccagctgctcatcgaggacaaggagggcatcaagcagctggga
gatgacaaagccaccatccccgtgacggacgctgagttcagccaagctgtcaacccacag
agtttctgcactggtgtctccttgcaccacccagccctcatccagagcacgggacccctc
atcgacatgtctgacatccggccaggcaccaacccagtgtccaggaagagtgtgaaggca
gcccacagcacccggaaccggtactcgagccagtggactctgaccaagtgccaggcctcc
acccctgcccgcaccctcgcctctgactggcgcactgtggggtcccagcacggggtcact
gtcacggagagtgacagctacagtgccagcctgtcccaggacacagacaaaggacggaac
agcatggtgtccactgagagcgcctcgtccacctatgaggagctggcccgggcctatgag
cacgccaagctggaggagcagctgcagcatgccaagttcgagatcaccgagtgcttcatc
tcggacagctcctccgaccagatgaccacaggcaccaacgagaacgccgacagcatgacg
tccatgagcacaccctcggagcccggcatctgtcgctttaccgcctccccgcccaagccc
caggatgccgaccgaggcaagaacgtggcagtgcccatcccgcaccgggccaacaagagt
gactactgtaacctgcccctgtacgccaagtcggaggccttcttccgaaaggcagatggc
cgtgagccctgtccggtggtcccaccccgagaggcttccgtccggaacctggctcgaacc
taccacacccaggctcgccacctgaccttggaccctgccagcaagcccctgggcctcccg
cacccagggggccctgctgccgccgccacagccactttacctcagaggactctggccatg
ccagcacccccagccggcacggccccgccagctcccggccccacccctgccgagccccca
gctgcccccagcgctgcccctccggcccccagcaccgagcctccgcgggccgggggccca
cacaccaaaatggggggctccagggactcacttctcgagatgagcacatcgggggtaggg
aggtctcagaagcagggggcaggggcctactccaaatcctataccctggtgtag
DBGET
integrated database retrieval system
