Neomonachus schauinslandi (Hawaiian monk seal): 110586442
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Entry
110586442 CDS
T08474
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
110586442 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsu03000
]
110586442 (CIC)
Transcription factors [BR:
nsu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110586442 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
110586442
NCBI-ProteinID:
XP_021552318
UniProt:
A0A2Y9HRG0
LinkDB
All DBs
Position
16:11763975..11790534
Genome browser
AA seq
2523 aa
AA seq
DB search
MKPMKKACVGLPGSGSGGKSPPATRAKALRRRGAGEGDKPEEEDEMVQQQPPPPQGPEEA
EEGEEEESERGPGAEGLPPELPPDDPAAPGPAEDPKVEGEASRWEPSLSRKTATFKSRAP
KKKYVEEHGAGSGSSGPAGAPEERARTPEEASALSVPPRPPTSTRSSSTDTASEHSADLE
DEAAEACGPGPWPPSGTSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPG
DRALTFYEGAPGGGVDVVLDATPPPGALAVGTAVCTCVEPGVAAYREGVVVEVATKPAAY
KVRLSPGPTSQPGPPAAPPQPPQLPHREPEEAVWVARSSLRLLRPPWEPEALPRKPPGGP
EEEQAEPGGALPPCPAALDPKQPEDAEVSKISFGGNLGTCEEGEEKHPPALGTPALLPLP
PPQLLSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPARARTPLTAAQ
QKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADS
GPGGAGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECE
AAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAV
RSRHLSASTPKGGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTEL
LPHPGALGAPGAGGGGATPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQ
PSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVSTAGEARAAG
PGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAF
HPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQP
DPSVQPSEAQQPASHPVASTQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGPG
PPHTLGVVEPGKGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKR
RTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRT
VSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLA
GGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSSSCGTERLHAVGGPGS
ARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFSASSEGGA
LAASGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSAADIDLKCKE
RVTDSESGDSSGEDPEGSKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPPPPAFGKGY
GPTPSSSSSSSSSPASSSASAATSFPLGSGTFKAQESGQGSTAGPLRPPPPGPGGPVTPS
KATRFLPTDPAAFRRKRPESVGGLEPPGPSVIAAPPGGGGSVLQTLVLPPNKEEREGGGT
RMPSAPAPSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTAGRAEASPNDTA
GARTEPVTGSRAPGSSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLV
GTPGYGAPAPPAVQFIAQGAPGSGATTGSGAGAGSGPNGPVPLGILQPGALGKAGGITQV
QYILPTLPQQLQVAPAPAPAPGTKAAAPGGPAPTTSIRFTLPPGTSTNGKVLAATAPTPG
IPILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLV
SPPFSVPVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLSGPTSQPQKVLLPSSTRIT
YVQSAGGHALPLGTSPTSSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLA
PGQVGVSPVPSPQLPPTCTAPGGPVITAFYPGSPAPTSSAPLAQPSQAPPGLVYTVATST
TPPAATILPKGPPAPATATPAPTSPFPNATGSMTYSLVAPKAQRPTPKAPQKVKAAIASI
PVGSFEAGAPGRSGPAARQPLEPGPAREPPTPESELEGQPTTPAPPPPPETWAPTARSSP
PQPPPAEERTSTKGPEAMASKFPSSSSDWRVPGLGLESRGEPPTPPSPAPAPAPAPGGGG
GSEGSSGRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEF
RPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPN
TPKSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFP
SAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTGTAA
APVPTPSPAGGPDPTSPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPPGPSPAA
TGR
NT seq
7572 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcatgtgtcggcctcccgggttctggcagtggtggcaagtcc
ccaccggccactcgggccaaggccctgagacggcgaggggctggggagggcgacaagccg
gaggaggaagacgaaatggtgcagcagcagccgccgccgcctcaggggccagaagaggct
gaggagggtgaggaggaggagtccgagcggggccctggggctgaggggctgcccccggag
ctgccccctgacgacccggcggccccaggccccgctgaggaccccaaggtggagggggag
gcgagccgctgggagccgtcactcagccgtaagacggccacgttcaagtctcgagcgccc
aagaagaagtatgtggaggagcatggagctggcagcggtagcagtgggccagccggggcc
cctgaagagcgggcacggacccctgaggaggccagcgccctgagtgtccctccacggcca
cccacctccacccgttcctcttccaccgacacggccagcgagcactcagccgacctggag
gatgaggcagccgaggcttgtgggcccggcccctggcccccaagtggcaccagcggcggc
tatgacctgcggcagctgaggtcccagcgggtgctggctcggcgtggagacggcctcttc
ctgccggccgtggtgcgccaggtgcgccgaagccaggacctgggggtgcagttccccggg
gaccgggccctgacgttctacgagggggcccccggcggcggtgtcgatgtggttttggac
gccacgccgccgccgggggccctggcggtgggcacagctgtctgtacctgcgtggagccc
ggcgtggctgcctaccgtgagggtgtggtggtggaggtggccaccaagcccgctgcctac
aaggtccgcctgagccccggccccacctcccagccgggcccgccggccgccccaccgcag
cccccgcagctgccacaccgtgagcctgaggaggccgtgtgggtggcccgctccagcttg
cgcctgctgcggcccccgtgggaacccgaggccctgccaaggaagccccctgggggcccc
gaggaggagcaggctgagccggggggcgccctgcccccctgccctgccgccctggacccc
aagcagcctgaggatgcggaggtgtcgaagatcagctttggtggcaacctggggacttgc
gaggagggcgaggagaagcacccgccggccctgggcaccccggccctgctcccactgccc
ccgccccagctcctgtcgcccccgcccaagtccccagctttcgcaggccccggccgccct
ggcgagcagccgtcgccctgccaggaggggagccagggcgggagccggagcagcagcgtg
gcctctctggagaagggggctgcgcccgcccgggcccgcacgccgctgacagccgcccag
cagaagtataagaagggggatgtggtctgcacgcccaatggaatccgcaagaaattcaat
ggcaagcagtggcgccggctgtgctcccgagacggctgcatgaaggagtcgcagcggcgg
ggctactgctcgcgccacctgtccatgcgaaccaaggagatggagggcctggcggacagt
ggccccggtggggccgggcggccggcaggcgtggcggcacgtgagggcagcaccgagttt
gactggggtgacgaaacatcgcgggacagtgaggccagcagcgtggcggcccgcggggac
tcgcgcccacgcctggtggctcctgctgacctgtcgcgctttgagttcgacgagtgtgag
gcggccgtgatgctggtgtcgttgggcagctctcgctctggcacgccctccttctctccc
gtgtctacgcagtcgcccttctcaccggccccctcgccctccccctcgccgctctttggc
ttccgccccgccaacttcagccccatcaacgcctcaccagtcatccagcgcactgccgtt
cgcagccgccacctgagcgccagcaccccaaaggggggcgtgctgacaccaccggacctg
ggcccccacccaccgccgcctgcccccagagagcgccactcttctggcatcctacccacc
ttccagaccaacctgaccttcaccgtgcccatcagccccgggcggaggaagacagagctg
ctgccccacccgggggctttgggggcgcctggtgcggggggcgggggagccaccccggac
ttccccaagagtgacagcctggactccggcgtggactcggtgtcccacacgcctacaccc
tccacaccggctggcttccgggctgtgtcacccgccgtgcccttctcccgatcccgccag
ccctcgccgttgctgctcttgcccccgcctgctggcctgacctcggaccctgggccctct
gtgcgcagggttcctgctgtgcagcgggactcacccgtcattgttcgcaaccctgacgtc
ccgctgccctccaaattccctggggaggtgagcactgcaggcgaggcacgggcagcagga
cctgggcggggctgccgagagaccccggtgccccctggggtggccagtgggaagcctggc
ctgcccccacctctgccagcccccgtgcccatcaccgtgcctccggccgcgccgactgcc
gtggcccagccgatgcccaccttcggcctggcttcttcacccttccagccggtggccttc
cacccctcacctgctgccctattgcccgtcctggtgcccagcagctacaccagccatcct
gcccccaaaaaggaagtcatcatgggccgacctgggacagtgtggacgaatgtggaacct
cgctctgttgccgtgttcccctggcactccttagtcccctttctggcccccagccagccc
gacccctctgtgcagccaagtgaggcccagcaacctgccagccacccagtggcctccacc
cagagcaaagaacctgctgagtccgcggctgtcgctcatgagcagccaccaggtgggaca
gggaatgctgatcctgggcggccccctggagccacctgccctgagagcccagggcctgga
cccccccacactttgggggtggtggaacctggaaagggtccccctcccaccactgaggag
gaggcccctggccctccaggagagccccggctggacagcgagacggagagtgaccatgat
gatgcattcctctccatcatgtctcctgagatccagttgcccctgccacccgggaaacgc
cggacccagtccctcagtgccctgccaaaggaacgagactcctcgtcggagaaggatgga
cgcagccccaacaagcgggagaaggaccatatccggcggcccatgaacgccttcatgatc
ttcagcaagcggcaccgggccctggtccaccagcgtcaccccaaccaggacaaccggacc
gtcagcaagattctgggcgagtggtggtacgccctggggcccaaggagaagcagaagtac
catgacctggctttccaggtgaaagaggcccactttaaggcccacccagactggaagtgg
tgcaacaaggaccggaagaagtccagctcagaggccaagcccacgagcctggggctggca
ggcgggcacaaggagactcgggagcggagcatgtcagagacagggactgccgctgcccct
ggagtgtcctcggagctcctgtccgtcgcagcccagaccctcttgagctcggataccaag
gctccggggagcagctcctgtgggacagagcgtctgcatgcagtggggggacctggctcg
gcccggccccgagccttctcccacagtggggtccacagcctggatggtggggaagtagat
agccaggcactacaggaactgactcagatggtgtctggccctgcatcctattctggtcca
aagccttccacccaatatggggctccaggccccttctcagcctccagtgagggaggtgcc
ctggcggctagtgggcgacccccgctgctgcccacccgggcctcccgttcccagcgtgca
gccagtgaggacatgaccagtgacgaggaacgcatggtcatctgcgaggaggagggagac
gatgatgtcattgctgacgacggcttcagcgccgctgacattgacctcaagtgcaaggag
cgggtgactgacagcgagagcggagatagctctggggaggacccagagggcagcaagggc
tttggccggaaggtgttctcgcctgtgattcgttcctcttttacccactgccgcccaccg
ctggaccctgagcccccagggcccccggatccaccacctccagcctttggcaaaggctac
gggcccaccccatcctcctcctcctcctcctcgtcctcacctgcctcctcctcagcctct
gccgccacctccttccccctgggctcagggaccttcaaggcccaggagtcaggtcagggc
agcacggcaggcccactacggcccccacctcctgggcctgggggtccagtgacaccttcc
aaggccacccggttcctcccaacggatcctgccgccttccggcgcaagagacctgaaagt
gtgggaggcctggagccaccgggcccctctgtcattgcggcacctcctggcgggggagga
agtgtcttgcagacgctggtcctgcccccaaataaggaggaacgggaaggtggcggaacc
cgcatgccctcggccccagccccatcactggcctatggggccccagcggcccccctgtcc
cgcccagctgctaccatggtcaccaatgtggtgcggcctgtcagtagcactcctgtgccc
atcgcctctaagcccttccccaccgctggccgggctgaggcatctccaaatgacacagca
ggtgccaggactgagcctgtcacagggtcccgggcgcctgggagctccccgctgggcgta
agcttagtgtattcggacaagaagtcggcagcagccacctcgccggccccacatctggtg
gctgggcccctcctgggcactgtggggaaggcccctgccacagtcaccaacctgctggtg
ggcacacctggttatggggccccggcgccccctgctgttcagttcatagcccagggggcc
cctggcagtggggccactacaggctcaggagcaggtgctgggagtggccccaatgggcca
gtgcccctgggcatcctgcagccgggtgccttgggcaaggctgggggaatcacccaggtg
cagtacatcctgcccacgctgccccagcagcttcaggtggcacctgccccagcaccagcc
cctgggaccaaggcagcagctcctggtggccccgcacccaccaccagcatccgtttcacc
ctcccaccgggcacctccaccaatggcaaagttctggcggccaccgcacccactcctggc
atccccatcctgcaatccgtaccctccgccccgccccccaaagcccaatcggtttctcct
gtgcaggccccacccccgggcggctcagcccagctgctacctgggaaggtcctggtgccc
ctggcagcccctagcatgtcggtgcggggcggaggggctggccagccactgcccctggtg
agcccgccgttctcggtacctgtgcagaatggggcccagccacccagcaagatcatccag
ctgactccggtgcccgtgagcacacccagcggcctggtgccgcccctcagcccagccacg
ctctccggacccacctcgcagcctcagaaggtcctgctaccctcctccaccagaatcacc
tacgtgcagtcggcgggtgggcacgcgttgcccctgggcaccagccctacgtccagccag
gctggaacagtcacctcgtatgggcccacgagctcggtagccctaggcttcacctcactg
gggcccagcggacccgcctttgtgcagcccctgctttcaggccaagccccgctgctggct
cctggccaggtgggcgtgtcacccgtgcccagtccccagctgccgcccacctgcacggcc
cccggaggtcccgtcatcacggcgttttaccctggcagccctgcacccacttcctcagca
cccctggcccagccatcccaggcgcccccaggcctggtctacaccgtggccactagcacc
accccacctgctgccaccatcctgcccaagggcccaccagctcctgccactgccactccg
gcccccaccagccctttccctaatgccacaggctccatgacctacagcttagtggccccc
aaggcccagcggcccacccccaaggccccccagaaagtgaaggcggccatcgccagcatt
cccgtgggttcgtttgaggcaggtgcccctgggcggtcaggccctgcagcccggcagccc
ttggagcctggcccagcccgggagccccctacccccgagtctgagcttgaggggcagcct
acgacaccggcccctccaccgcccccagagacctgggctcccacagcccggagcagcccc
ccgcagcccccacctgctgaggagcgaacaagcaccaagggccctgaggccatggccagc
aaattccccagctcgtcttcagactggcgagtccctgggctgggtctggagagccggggg
gagcctcccacccctcccagcccagcaccagctccagccccggccccgggcggcggcggc
ggcagcgagggcagcagcgggagggcagctggggacacccctgagcgcaaggaggctgct
ggtaccggcaagaaggtgaaggtgcggcccccgcccctgaagaagacctttgactctgtg
gacaacagggtcctgtcggaggtggacttcgaagagcgctttgccgagctgcccgagttc
cggcctgaggaggtgctgccctcaccgaccctgcagtctctggccacctcaccccgggcc
atcctgggctcctaccgcaagaagaggaagaactccaccgacctggactcagcccccgag
gaccccacctcgcccaagcgcaagatgaggagacgctccagttgcagctccgagcccaac
acccctaagagtgccaagtgcgagggggatatcttcacctttgaccgcacaggtacggaa
gccgaggacgtgcttggggagctggagtacgagaaggtgccatactcctcactgcggcgc
accctggaccagcgccgggccctggtcatgcagctcttccaggaccatggctttttccca
tcagcccaggccacggcagccttccaggcccgctacgcagacatcttcccctccaaggtc
tgtctgcagttgaagatccgcgaggtgcgccagaagatcatgcaggcggccactcccacg
gagcagccccctggagcagaggcccccctccccggaccgccccccactggcactgctgct
gcccctgtccccactcccagccctgctgggggccctgaccccacctcacctggctcggac
tctggcacagctccggctgccccgccactgcccccacctccagagccgggtcccggacag
cctggctgggagggccccccccagccctcccccccaccccccggcccctccccagctgcc
acaggcaggtga
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integrated database retrieval system
