Neomonachus schauinslandi (Hawaiian monk seal): 110586538
Help
Entry
110586538 CDS
T08474
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04820
Cytoskeleton in muscle cells
nsu05169
Epstein-Barr virus infection
nsu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110586538 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110586538 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110586538 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110586538 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nsu04812
]
110586538 (VIM)
04147 Exosome [BR:
nsu04147
]
110586538 (VIM)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
110586538 (VIM)
Cytoskeleton proteins [BR:
nsu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
110586538 (VIM)
Exosome [BR:
nsu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110586538 (VIM)
Exosomal proteins of other cancer cells
110586538 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF7491
TPR_MLP1_2
RBD-FIP
GeBP-like_DBD
Sec10_N
DUF4515
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
110586538
NCBI-ProteinID:
XP_021552440
UniProt:
A0A2Y9HSR8
LinkDB
All DBs
Position
5:complement(121734735..121742745)
Genome browser
AA seq
466 aa
AA seq
DB search
MSARSVSSSSYRRMFGGPGTGSRPSSTRGYVTTSTRTYTLGSALRPSTSRSLYASSPGGA
YATRSSAVRLRSSAPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQDQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcacc
gggagccggccgagctccacacggggctacgtgaccacgtccacccgcacctacaccctg
ggcagcgcgttgcgccccagcaccagccgcagcctctatgcctcgtcccccggaggcgcg
tacgccacgcgctcctccgccgtgcgcctgcgaagcagtgcgcccggcgtgcgcctgctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaagtggagctgcaggagctgaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggc
cagggcaagtcacgcctgggggacctctacgaggaggagatgcgggagctgcgccggcag
gtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctggccgag
gacatcatgcggctccgggagaagttgcaagaggagatgcttcagagagaggaagccgag
agcaccctgcagtctttcagacaggatgttgacaatgcttctttggcacgtcttgacctt
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactacatgatgag
gaaatccaggagctgcaggcccaaattcaggaccagcatgtccaaatcgatatggatgtt
tccaagcctgacctcacggctgccctgcgtgacgtacgccagcagtatgaaagcgtggct
gccaagaaccttcaggaggctgaggaatggtacaagtccaagtttgccgacctctctgag
gctgctaaccggaacaacgatgctctgcgccaggcgaagcaggagtcgaatgagtaccgg
agacaggtgcagtccctcacctgtgaagtggacgccctcaaagggactaatgagtctctg
gaacgccagatgcgtgaaatggaagagaacttcgccgtcgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaacatgaaggaagagatggcccgtcacctt
cgggaataccaggacctgctgaatgtcaagatggctctcgacatcgagattgccacctac
aggaagctgctggaaggcgaggagagcaggattgctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggattccctccctctggttgacactcactcaaaaagg
acacttctgattaagacggttgagactagagatggacaggttatcaatgaaacttctcag
catcacgatgaccttgagtaa
DBGET
integrated database retrieval system
