Neomonachus schauinslandi (Hawaiian monk seal): 110586808
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Entry
110586808 CDS
T08474
Symbol
SYNPO
Name
(RefSeq) synaptopodin isoform X1
KO
K21112
synaptopodin
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110586808 (SYNPO)
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
110586808
NCBI-ProteinID:
XP_021552778
UniProt:
A0A2Y9HM02
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Position
7:complement(108983220..109018174)
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AA seq
925 aa
AA seq
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MLGPHLPPPPRGLSEDRPTSCTFRIPDGSYRCLALEAEESSSEEGLQGEAGLVNLEEDRN
GDNSACRATQGAPELPNALGIQPPSCFREARGGPQHDNRASQDWVVVKAQQVVTAHSSSS
PSPGPRVAQKPALGPSTSLTERDLKEAKARSQQIAAQLTTPPSSSSRGVQLFNRRRQRVN
EFTLENHGRRGQKPSQESLRVPPASPTGYASGLSLSPTSLPEPGPPRNADSQSPDIGVPA
HSMEGCSEKANLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSPASPP
TAEVHSPAADVNKNVSSLSATLIVPASNSTHSLPATDNNQNPPAPVTPQSLPLSNSQQPS
EAQLPPNGTVSDPKPGTLCSGGQPPEPAAEVRSSTLLIDKVSAPPTTTSTFSKETTPLSS
SGTPAPDFMSSSLLIDIQPSAPAVSAEQETSGWAATPTPAKLYSEVHFTLAKPPSVVNRT
ARPFGIQAPGSTSQMERSPMVERRHLGEKALAPQPSSMADRSPRPQRHVMSHSPMVERRS
VAQRSPALERRPLGNFTPPPTYAETLSTAPLASRVRSPPSYSALYPSSDPKPSPLKGQAV
PASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEAGVEDE
PFALGAEASNFQQESAPRDRASPAAAEEILPEWASCLKSPRIQAKPKPKPNQNLSEASGK
GAELYARRQSRMEKYVIESSGHTELARCPSPTMSLPSSWKYSTNAPGAFRVASRSPARTP
PASLYHGYLPENGVLRPEPTKQLAYQLRPSLFVLSPIKEPVKPSPRAASPAKPSSLDLVP
SLPKGALPASPALPRPSRSSPGLYSSPGQDGLQPTAVSPTYSSDISPVSPSRAWSPRARQ
APRPSFSTRNAGIEAQVWKPSFCFK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtccccacctcccacctccaccccgtggactcagtgaagacaggcctacctcc
tgcaccttccggatccctgatgggagctacaggtgtctggccttggaggctgaggagagc
agcagcgaggagggcctccagggagaggcagggctcgtgaacttggaggaggacaggaat
ggggacaactcggcttgcagagccacccaaggggcaccagagctgcccaatgccctgggc
atccagccacccagctgcttcagggaagcacgaggggggccccagcatgataacagggcc
agccaggactgggtcgtggtgaaggctcagcaggtggtgacagcccattccagctccagc
cccagccctgggcccagggttgcccagaaaccagccttgggcccgagcactagcctcact
gagagagatctgaaagaggcgaaggcccggagtcagcagatcgcagcccagctgaccacc
cctcccagctccagctcccgcggcgtccagctcttcaacaggcggcggcagagggtgaac
gagttcaccttggagaaccacggccggagaggacagaagcccagccaggagtccctccga
gtgccccctgccagccccacaggctatgcctcagggctcagcttgagtcccacctcactc
cctgaaccaggccctccgaggaacgccgacagccagagccctgacataggggtccctgct
cacagcatggagggatgctcggagaaggccaacttgctgcggcacctggagaaggtggcc
agcgaggaggaggaggtacccctggtggtttatttgaaggagaacgcagccctgctgacg
gccaacggactgcacctgtcccagaaccgagaagcccagcagagcccagcaagcccgccg
acggctgaggtccacagcccggctgcagatgtcaacaaaaacgtttcctcactcagtgcc
accctcatcgtgccagcctctaacagcacccacagcctgccggccacagacaacaaccag
aaccccccggcacctgtcactccacagagcctgccgctttcaaacagccagcagccctcg
gaggcacagctccctcccaatggcacggtgtcagatcccaaacccggcaccctgtgttcc
ggcgggcagcccccggagccggctgcggaggtgagatccagcacactcctaattgataag
gtgtcagctccacctaccaccaccagcaccttctccaaagaaacgactcccctctccagc
tccgggaccccagccccagatttcatgtccagctccctgctcatcgatatacagcccagt
gccccagcggtgtcagcagaacaagagacgtctgggtgggcggccacgcccacgcccgcc
aagctatacagtgaggtccacttcacactggccaagcccccatcagtggtcaacaggacc
gccagacccttcgggatccaggcgccagggagcaccagccagatggagcggagccccatg
gtagagagacgacatctcggggagaaggccctggctccccagccctccagcatggcagac
aggagccctcggccacagagacacgtgatgtcccatagccccatggtggaaaggaggtct
gtggcacagcgaagccctgccttggagagacgccccttggggaacttcaccccacccccc
acctatgccgagaccttgtccacggcccccctggcttcccgggttaggtctcccccgtcc
tactctgccctttaccccagctctgaccccaagccttctcctctgaagggccaggcagtt
cctgccagcaagacgggcattttggaggagtcgatggcccgcaggggcagccggaaatcc
atgttcaccttcgtggagaagcccaaggtgaccccaaatccagacctgctggatctggta
cagacggccgatgagaagcggaggcagagggaccagggggaggcaggcgtggaggacgag
cccttcgcgctgggggccgaggcctccaactttcagcaggagtcagcaccccgggacagg
gccagccctgcggcggctgaggagatcctcccggagtgggcctcgtgcctcaagtcaccg
cgcatccaggccaagcccaagcccaagcccaaccagaacctgtccgaggcctccgggaag
ggggctgagctctacgcccgtcgccagtcccggatggagaagtatgtcatcgagtcctcg
ggccacaccgaactggcccgctgcccttcgcccaccatgtccctgccttcatcctggaaa
tattccaccaatgctcctggtgccttccgagtggcatcccggagcccagctcggaccccg
cccgcctccctctaccacggctacctgcctgagaacggggtcctgcgccccgagcccacc
aagcagctggcctaccagctgcggccctcgctcttcgtcctctcgcccatcaaggagcct
gtcaagccctcaccgagagccgcctctcctgccaagccgagctccctggacctggtgccc
agcctccccaagggggccctcccggcatccccggccctgcctcggccctcccgctcctca
ccgggcctctacagctcccctggccaggacggcctccagcccacagccgtgagcccgacc
tacagcagtgatatctcccccgtgtcgccctccagggcatggtctccccgcgccaggcag
gcccccaggccctccttctccacccggaatgctgggatcgaggctcaggtgtggaagcct
tccttctgcttcaagtaa
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