Neomonachus schauinslandi (Hawaiian monk seal): 110587151
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Entry
110587151 CDS
T08474
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsu03041
]
110587151 (DDX1)
03016 Transfer RNA biogenesis [BR:
nsu03016
]
110587151 (DDX1)
Enzymes [BR:
nsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110587151 (DDX1)
Spliceosome [BR:
nsu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110587151 (DDX1)
Transfer RNA biogenesis [BR:
nsu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
110587151 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Paramyxo_PNT
DUF5766
Motif
Other DBs
NCBI-GeneID:
110587151
NCBI-ProteinID:
XP_021552990
UniProt:
A0A2Y9HUF0
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Position
10:11598447..11633203
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AA seq
740 aa
AA seq
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MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHLKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKASDSYVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPLDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttttctgagatgggtgttatgcctgagattgctcaagctgtagaagagatg
gattggcttctcccaactgatatccaggctgaatctatcccactgatcctaggaggcggt
gatgtacttatggctgcggaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaaatggcaaatgaacccatatgatagaggatct
gcttttgcaattgggtctgatggtctttgttgtcaaagcagagaagtgaaggagtggcat
ggatgcagagctactaaaggattaacgaaagggaagcactactatgaagtatcctgtcat
gaccaaggattatgcagagttgggtggtcttccatgcaggcttccttagacctaggtact
gacaagttcggatttggctttggtggaacaggaaagaaatcccataataaacaatttgat
aattatggagaggaattcactatgcatgataccattggatgttaccttgatatagataaa
gggcatctcaaattctccaaaaatggaaaagaccttggtctggcatttgaaataccacca
catatgaagaaccaagccctctttcctgcttgtgttttaaagaatgccgaactaaaattt
aactttggtgaagaagaatttaagtttccaccaaaagatggttttgttgctctttccaag
gcatcggatagttatgttgttaaatcacagcacacaggtaatgcacaagtggcacaaacg
aagtttctccccaatgctccgaaagctctcatcgtcgagccctcccgggagttagctgaa
caaactttgaataacgtcaagcagtttaagaaatatattgataatcctaaattaagggag
cttctgataattggaggtgttgcagcgcgggatcagctctctgttttggataatggggta
gatatagtcgttggcactccaggaagactagatgatttggtgtcaactggaaaactgaac
ttatcccaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggttac
tctgattttataaataggattcacaatcagattcctcagattacctctgatgggaaaaga
cttcaggtgattgtttgctctgctactttgcattcttttgatgtgaagaagctgtctgag
aagataatgcattttcccacatgggttgatttaaaaggagaagactccgttccggacact
gtacatcatgttgttgtcccagtgaatcccaaaactgacagactctgggaaaggcttggg
aaaaaccacattagaactgatgatgtacatgcaaaagataacacaagacctggtgctaac
agtccggagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattattttctgtagaaccaaaattgactgtgac
aacttggagcaatattttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtttgtcttcatggggacagaaagcctcatgaaaggaagcaaaacttggaaaga
tttaagaaaggagatgtaagattcttgatttgcacagatgtagccgccagagggattgat
atccatggtgttccttatgttataaatgtcaccttgcctgatgaaaagcaaaactatgta
catcgaattggcagagtaggaagagctgaaaggatgggtctggccatttccctggtggca
acagagaaagaaaaggtttggtaccacgtatgtagcagccgtggaaaaggatgttacaac
acaagactcaaggaagatggtggctgcaccatatggtacaatgagatgcagttgctctct
gagatagaagagcatctgaattgcaccatttctcaggttgaaccagatataaaggtacca
ttggatgaatttgatgggaaagtcacctatggtcagaaaagggccgctggtggtggaaac
tataaaggccatgtggatattttggcacctacggttcaagagttggctgcccttgaaaag
gaggcgcagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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