Neomonachus schauinslandi (Hawaiian monk seal): 110587371
Help
Entry
110587371 CDS
T08474
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsu03000
]
110587371 (SOX30)
Transcription factors [BR:
nsu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110587371 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
110587371
NCBI-ProteinID:
XP_021553294
UniProt:
A0A2Y9HTV1
LinkDB
All DBs
Position
7:102939678..102968275
Genome browser
AA seq
768 aa
AA seq
DB search
MERARPEPQPQPRQLPRATPPRPLRPAPPQLPVEGASFRAEAAELPPSPPTPCAAAIATV
ASSCREAQASGVQPAARRLLQVKPEQVLLLPPGPPLAQARDEGVVASPAQARLLQLRPEL
LLLPPPPPPASDGAPCRPELHPVQPRALHVKAEKQEQGRGLDPSAGTRRPVEAGPRASRA
AKVEGPGPALDWRRGDEKGKLEAEEVIRDVAKGGEGKNLATIREGVIKTEEPERLREDCR
LGTEPASNGLVHGSKEVILAQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIR
LTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFM
VWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV
YQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTITHPVGDA
PPAIQLPTPAVQRPSPISLFQPSVSSTTQVAVQAPSLPLCPAVPPQHFAGPSQTDTHRLH
SGASRPVKRPTPVSLENTNRIPTSASTAHARFVTSTIQPPREYPSVSTCPRSAPIPQAPP
IPHSHVYQAPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSM
PECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESMDGTSYYNSHSHSGE
EYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccagagccgcagcctcagccgcgccaactgccacgggcaaccccg
ccgcgcccgctccgccctgctcctccccagctgccggtcgagggcgcctcctttagggct
gaggccgcggagctcccgccgtcgccgcccaccccgtgcgcggccgccattgcgaccgtg
gcctcgtcgtgcagggaggcccaggcgtcgggtgtacaacccgcggcacggcggctgctg
caggtgaagccggagcaggtgttgctgctgccgcctgggccaccactggctcaggcccgg
gacgaaggcgtcgtcgcttctcccgcgcaagcacggctgctgcagctgaggcccgagctg
ctgctgctgccgccgccgccgccgcccgcgtccgacggcgccccctgcagacccgagttg
cacccagtgcagccccgggcgctgcacgtcaaggccgagaagcaggaacaggggcgcggc
ttggatccgtcggcggggacgcgaaggcctgtggaggcgggccctagagcctccagggcg
gccaaggtggaaggcccggggccagctctcgactggcgccgaggggacgagaagggcaag
ttggaggcggaggaggtcataagggacgtggcgaaaggcggggaaggcaaaaacctggcg
accatcagagaaggagtcatcaaaacggaggagcccgagagactccgcgaggactgcagg
ctgggcacggagcccgcgtccaatggcctggtccatggcagcaaggaagtcatcctagcc
caaccatccagtgcctttgggccacaccagcaagacctcaggatccctttgactctccac
acggtcccccctggggcccggatccaatttcagggacctccaccttcagagctgatacgg
ttgaccaaggtccccttgacaccagtgcctattaaaatgcaatctttactggagccttct
gtaaaaattgaaaccaaagatgtcccgctcaccgtgcttccctcagatgcaggaatacca
gatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatg
gtttgggcaaggattcaccggccagcactagccaaagctaacccagcagccaacaatgca
gaaatcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaagaaaccc
tattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtt
tatcaacctcgtccagggaagcgaaaacgcttccctctaagtgtttccaatgtattttct
ggcaccacacagaatatcatctctacaaatcctacaacaatatatccttatcgctcacct
acctactctgtggtaattcccagcctacagaacaccatcactcatccagttggtgatgcc
ccacctgccatccagctgcccacacctgcagtccagcgcccaagccccatctcacttttc
cagcccagcgtctccagtactacccaggtggccgtccaggctccaagtctgcccctctgc
ccggcagtcccaccccagcactttgctgggccctcccaaacagacacgcatcggctgcat
tccggagccagtcgccctgtgaagagacccactccggtctctctggagaacaccaacagg
atcccaactagtgcaagtactgcccatgccagatttgtgacctcaaccatccaacctccc
agggagtatcccagcgtttccacttgtcccagaagtgctccaatcccccaggctcctcct
attccacactcacatgtctaccaggctcctccccttggccatccagccacgttgtttggg
acaccaccacgattttcttttcatcacccttacttcctacctggacctcactacttccca
tcaagcacgtgcccttatagtcggcctccctttggctatggaaattttccaagttcaatg
ccagaatgccttggttattatgaagacaggtaccaaaaacatgaggctatgttttcagct
ttaaatagagactatccttttagagactacccagatgaacgtacgcacagtgaagattct
cggagttgtgagagcatggatgggacctcttactataacagtcatagccacagtggggaa
gaatacttaaaccccatgcctcagctggacattggagccttggagaacgtcttcacagcc
ccaacatcaactccctctagcatccagcaagtcaatgtcactgacagtgatgaggaggaa
gaagaaaaagtgctcaggaatttataa
DBGET
integrated database retrieval system
