Neomonachus schauinslandi (Hawaiian monk seal): 110587372
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Entry
110587372 CDS
T08474
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110587372 (GEN1)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110587372 (GEN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
SpoU_methylas_C
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
110587372
NCBI-ProteinID:
XP_021553292
UniProt:
A0A2Y9HNX4
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Position
10:13363214..13387006
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AA seq
907 aa
AA seq
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MGVNDLWQILEPVKQHLHLHDLCGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRI
SYLTLMDVKLVFVMEGEPPKLKADVISRRNQIRYGPSGKTWSQKTGRSHFKSVLKECLDM
LECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDVFLYGAQTVYRNFTMNTKDPHVD
CYTMSSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLIRTLKGQSLLQRFTQ
WNEESCSDPQPLAIKKLAHCSVCSHPGSPKDHVRNGCKLCKTNQYCEPHDYEYCCPCEWH
RTEHDRQLSAVENSIKKKACSCEGFPFHKVIQEFLSNKDKLVKVIRYQRPDLLLFQRFTL
EKMEWPNHYACEKLLVLLTHYDMIERKLGRRNSNQLQPIRILKTRIRNGIHCFEIEWEKP
EHYALEDKHGELVLQTIEEESLFEAAYPEIVAVYQKQNLELKGKKQKSMKIKSKESNWLE
SDNTKSFQSQMTLNPTCEVFSKQNSNLHLEITPDRALPQKSISASLNSLILPEDTLCLNT
QEHLVSSPRPLAMQQVTAVSKSLIPESSQPSTSSHNISAIADLQLSTIDWEGTSFSNSPA
IPRNTSSHGLKSELETAIPENFKHFPEELSCESEWCTTNINEVLDQDLQKTNPEEHLLSG
ITHLHLQDLPLKERIHIKSSYPQDNARPNVDLKTLSLLTIKESCITNSGSDCPSHLSNDL
LGVHLQNEPRKSKVLKGDQLFRENYKMNTSKSYSVNNPIVKTSSVRAGPPNTALDHSRKV
DVQTTQRSVMKKSVCLDRHSSDEESVPVFEKAKNTTQKMKHSSQKRNPAQFEKDDANKLN
NPKIYMKETEQCVQAYKTAGNEEYCFPDAAKGSLSFLQRHKYKGDSGTSLDSPLPLCQRL
KLRFQNS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaatgacttgtggcaaattttggagcctgttaagcagcacctccacttgcat
gatctttgtgggaaaaccattgcagttgatctgagtctctgggtatgtgaagcacagaca
gtcaaaaaaatgattggaacagtcatgaagccccacctcaggaacttattttttcgtatc
tcctatttaacactaatggatgtaaaactggtgttcgttatggaaggggagcccccaaag
ctgaaagctgatgtcataagcaggaggaatcagattcggtatgggccttcgggaaaaaca
tggtctcagaaaacagggagatcacattttaaatcagttttaaaagagtgccttgatatg
ctggaatgcttaggcattccctgggtccaagctgctggggaagctgaagccatgtgtgct
tatcttaacgccagtggttatgtagatggctgtctcaccaatgatggggatgttttcctc
tatggcgcccagactgtttataggaatttcactatgaataccaaggatccacatgttgat
tgttatacaatgtcatctatcaagagtaaactaggtttggatagagatgctctggttgga
ctagccgtactacttggctgtgattatcttccgaagggagtccctggagttggcaaagag
caagcattaaaacttatacggactttgaaagggcaaagtttacttcaaaggtttactcag
tggaatgaagaatcatgctctgatccacaaccactagctattaaaaaactggcccattgt
tctgtgtgttcccatccaggttcacctaaggatcatgtacgtaatggatgcaaactctgt
aaaactaatcaatattgtgaaccacatgattatgaatactgttgtccttgtgagtggcac
cgtacagagcatgatagacaactgagtgcagtagagaacagcattaaaaaaaaagcttgc
agttgtgagggattcccattccataaggttattcaagaattcctttcgaacaaggataaa
ttggtgaaggtaatcaggtaccaaagacctgatttattattgtttcagagatttactctt
gaaaaaatggaatggcctaatcactatgcatgtgagaaattgctagtgcttttgacccac
tatgacatgatagaaagaaagcttggtagaaggaactctaatcaactacagccaattcga
atccttaaaacccggatcagaaatggaattcattgctttgaaatagaatgggaaaagcct
gaacattatgctctggaagataaacatggagaactggttctacaaacaatagaagaagaa
tcattgtttgaagccgcttatcctgagattgttgctgtttatcaaaaacaaaacttagaa
ctgaaagggaagaaacaaaaaagcatgaaaattaagtctaaagaaagcaattggctagaa
tcagataatacgaagagtttccagtcacagatgactttaaaccccacatgtgaagtcttt
tctaagcaaaattccaacttacatttggaaattacccctgatcgtgcattaccccagaaa
tctatttctgcatcattgaatagcttaattttacctgaagatactctctgtttgaataca
caagagcacttggtgtcttctccaagacctttggctatgcagcaagttacagctgtcagt
aagtctctaattccagaatctagtcaacctagtacctcatcccataacatatcagcgatt
gctgatctacaattaagcaccattgactgggaaggtacttcttttagtaattctccagct
attccaaggaacacttcctctcatggtttaaaatcagaacttgaaacagccatccctgaa
aattttaaacatttcccagaagaattatcatgtgaatcagaatggtgcaccacaaacatt
aatgaagtgttggatcaggatcttcaaaagactaatcctgaagagcatctactttctggc
attactcatttacatcttcaggatttgcctttaaaggaacgaatacatataaaatcatca
tatcctcaggataatgcacggccaaatgttgacctgaaaactttatccctacttaccata
aaagaatcttgtattactaacagtggttctgattgtccatcacatctctcaaatgatctt
ctaggtgttcatttgcaaaatgaacctagaaaatctaaagttctaaaaggagaccagcta
tttcgagaaaactataaaatgaatacttctaaatcttattctgtcaacaatccaatagta
aagacctccagtgttagagctggaccaccaaatactgctttagatcatagtagaaaagtg
gatgtgcaaaccactcagagaagtgtaatgaagaagagcgtttgccttgacagacattcc
tctgatgaagaaagtgtcccagtgtttgagaaagctaaaaacacaactcaaaaaatgaag
catagttctcagaagcgtaacccagcccaattcgagaaagatgatgccaacaagttgaat
aaccctaaaatatatatgaaagaaactgaacagtgtgtccaggcttataaaacagctgga
aatgaagaatactgtttcccagatgcagctaaaggttctctgagttttctacagcgtcat
aaatacaaaggtgactctggtacttctttggatagtcctcttcctttatgtcaaagatta
aaactaaggttccaaaactcttga
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