Neomonachus schauinslandi (Hawaiian monk seal): 110587562
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Entry
110587562 CDS
T08474
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110587562 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsu03021
]
110587562 (POLR1A)
Enzymes [BR:
nsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110587562 (POLR1A)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110587562 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
110587562
NCBI-ProteinID:
XP_021553444
UniProt:
A0A2Y9HU90
LinkDB
All DBs
Position
10:38873041..38945374
Genome browser
AA seq
1712 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQAVYELERILNRFLEENADPTAFEIQEELEQYTAKIVQNNLLGSHGAH
VKNVCESRSKLIAYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTVTYPAMVHKKADQKDT
EPLGIEEAQMGKRGYLTPTSAQEHLTALWKNEGFFLNYLFSGLENVDMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVAAPAK
DEEKDSSVVLDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAHVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTRDQYMELLYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLSLSGKAKINGKAWVQES
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRHRVIEESTHCGPRAVRAALNLPEAASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQSKHS
NGLLRKGAFLNYSQRIQAAVKALNLEGGNQNGRSLGTHQILNMWGELDEQSRRKYQKKAA
PCPDPSLAVWRPDIYFASVSETFEKKMDDYSLEWASQAEKSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFCIGDKQDKFQVYQLRFQ
FLPHAYYQQEKCLRPEDILHFVETRFLKILMESLRKKNNKASAFRSVNTRRATQRDLDNS
GESERNRGEQEGDEEEEGPIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEVEEDNDD
EDMQEEGAHKAQEQDEEVGLGPEEDSPPAAPLSQPRKSTRSREPQGAGAVERRVQAVRES
HPFIEDYQYDSEESLWCQVTVKLPLMKINFDMSSLVVLLAQSAVVYATKGITRCLLNETT
NKKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIEKEIRDV
FAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLG
SHDELRSPSACLVVGKVVRGGTGLFELKQPLR
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaatatgccctggcggaggctgcagggcatttccttcgggatgtat
tcggccgaagaactcaagaaattaagtgttaagtccattacaaaccctcgttacctggac
agcctggggaacccgtcggtgaacggcctgtacgatttagctttgggccctgcggattcc
aaagaggtgtgctccacctgcgtgcaggacttcaacaactgctctggccacctgggccac
attgagcttccgctcacggtgtacaaccctctcctctttgataaactctacctgctgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtgattcacctctta
gtctgccagctgcgagttctggaagtgggtgccctacaagcagtctacgagcttgagaga
attctgaacaggtttctagaagaaaacgctgatcctactgccttcgagattcaggaagag
ttagaacagtacacggccaaaattgtacagaacaatctgttgggatcccacggtgcacac
gtgaaaaatgtttgtgagagcaggagcaaactcattgcttacttctggaaggcacatatg
actgctaagcggtgtccccactgcaagaccgggcggtcagttgtccgaaaggagcacaac
agcaagctgacagtcacatacccagccatggtgcacaagaaggctgaccagaaggacaca
gagcccctgggaattgaggaagcccagatgggaaaacgagggtacctaacacccaccagc
gcccaagaacatcttactgccctttggaagaatgaaggattctttctgaattaccttttt
tcgggactggaaaatgtcgacatggagtctagattcaatcccagtatgttctttttggat
ttcctggtcgtgccaccctcaaggtatcgccctgtcaatcggctgggggaccagatgttt
accaatggccagacggtgaacttgcaggctgtcatgaaggacatggttctcatccgaaaa
cttctggcattgatggcccaagaacaggagctgccgtgtgaggtggcagcacctgccaag
gatgaggaaaaagactcttcagttgttctggaccggtcctttttgagtctgcttccaggc
cagtccctcacagacaaactttacaacatttggattcgtcttcagagccacgtcaatatt
gtgtttgatagtgagatggacaaattaatgatggaaaagtaccctggcattagacagatc
ctggagaagaaggatggcttattccgaaaacacatgatggggaagcgagtggactacgca
gcccgttcggtcatctgcccagatatgtacattaacaccaacgaaattggaattcccatg
gtgtttgccacaaaactgacctaccctcagccagtcaccccctggaatgttcaggaactg
aggcaagcagtcatcaatggccccaatgtgcacccgggagcctccatggtcatcaatgag
gatggcagccgcacagccctgagtgccgtcgacctgacccagcgggaagctgtagccaaa
cagctcctgacaccagccacaggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacatcctcctgctgaaccgacagcccaccctgcacagaccctct
atccaggcacaccacgcccgcatcctgcctgaagagaaagtcctgcggctccactatgcc
aactgcaaggcatataacgctgactttgatggagatgagatgaatgctcacttcccccag
agcgaactgggccgggccgaggcccatgtcctggcctgcacggatcagcagtaccttgtt
cccaaggatggccagccattggcggggttgatccaagatcacatggtttcgggtgcaaac
atgaccattcgaggttgctttttcactcgggaccaatatatggagctgctataccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcca
ctgtggacaggaaagcaggttgtgtcaacactgctcataaacataatcccagaggaccac
atcccactgagcttgtcgggaaaggcgaagatcaacggcaaagcctgggtgcaggagtcc
cctcggcctgttcctggctttaaccctgactccatgtgcgagtcccaggtgatcatcaga
gaaggggagctgctctgtggggtgctggacaaggcgcactacgggagctccgcctatggc
ctggtccactgctgctatgagatctatggcggggagaccagcggcaaggttctcacctgc
ctggcccgcctcttcaccgcctaccttcagctctacagaggtttcaccttgggggtggaa
gacattctggttaagccgaaggcagatgtgaagagacacagggtcatcgaagagtccacc
cactgcgggccgcgggctgtcagggctgcattaaacctgccagaagccgcttcatgtgat
gaggtccgaggcaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgccatttggcctgcacagacagttcccggaaaacaacttgcagatgatggtgcagtct
ggagccaaaggttcaactgtgaacaccatgcagatctcatgcctgctgggccaaatcgaa
ttggaaggtcggagaccccccttgatggcatctggcaagtcattgccctgctttgagcct
tatgagttcacccccagggccggcggtttcgtcactggcagattcctcactggcatcaag
cctcctgagttcttctttcactgcatggccgggcgagagggtctagtggacactgctgtg
aaaaccagccgctccggctatctccaaaggtgcatcatcaagcacttggaggggctggtc
gtccagtatgacctgactgtccgcgacagtgatggcagcgtggtacagttcctgtacggg
gaggacggcctggacatccccaagacgcagttcctgcagcccaagcagttccccttcctc
gccagcaactatgaggtgataatgaaatcgaagcatctgcatgaagttttatccagagca
gatccccaaaaagctctccgtcacttcagagccatcaaaaaatggcaaagcaagcattcc
aacggcctgctgagaaaaggcgccttcttgaattattcacagagaattcaggcagctgtg
aaagccttgaaccttgagggtgggaaccagaatggccgcagccttgggactcaccagatc
ttgaacatgtggggtgagttagatgagcagagtcgaaggaaataccagaagaaggcagct
ccttgtcctgaccccagtctggctgtttggcgcccagacatctactttgcatcggtgtca
gaaacatttgaaaaaaagatggatgactacagtctcgagtgggcatctcaagcagagaag
agttacgagaaatcagagctttctcttgacaggttgaggaccctgctgcagctgaagtgg
cagcgctcactgtgtgacccgggtgaggccgtgggcctgctggccgcccagagcattggg
gagccctccacgcagatgaccctgaacaccttccactttgctggcagaggcgagatgaac
gtcaccctgggcatcccgaggttgagggagattctcatggtggcgagtgccaacatcaag
acgcccatgatgagtgtgcccgtgttcaacaccaagaaagcactgaagagagtgaaaagc
ctgaagaagcaactcaccagagtatgcttaggggaggtgttggagaaaattgatgtccag
gagtcgttctgtatcggagacaaacaggacaagtttcaggtgtaccagttgaggtttcag
ttcctgccacatgcgtattaccagcaggagaagtgcctgagacctgaggacatcctgcac
tttgtggaaacaaggttcttaaagattctgatggaatccctcagaaagaagaataataaa
gcctcagctttcagaagcgttaacactcggagagctacccagcgggatctagacaactct
ggcgagtcggagaggaatcggggagaacaggaaggcgacgaggaagaggaggggcccatt
gtggacgctgaagctgaggagggggacgctgatgcttctgatgccaaacgcaaggagaaa
caagaagaggaggtcgattatgagagcgaggaagaggaggttgaggaggataatgacgat
gaggacatgcaggaggaaggtgctcacaaggcccaggagcaggatgaagaggtgggcttg
ggccccgaggaggactcgccccctgccgcccccctcagccagccccggaagtccactcgc
agcagagagccccagggagccggggccgtcgagcgccgggtgcaggccgtgcgcgagtcg
cacccgttcatagaggactaccagtatgactccgaggagagcctgtggtgccaggtgaca
gtgaagctccctctgatgaagattaactttgacatgagctccctggtagtgttgctggcc
cagagtgctgtcgtctacgcgaccaagggcatcacaaggtgcctcctcaatgaaaccacc
aacaagaagaatgagaaggagcttgtcttaaacactgaaggaattaacctgccggagctg
ttcaaatacgctgaggttctggacttgcgccgcctctattccaatgacatccacgccatg
gccagcacctacggcatcgaggccgcactgcgggtgatcgagaaggagatcagggacgtg
tttgctgtgtacggcattgcggtcgatccccgccatctgtccctggtcgccgactatatg
tgcttcgagggcgtgtacaagccgttgaatcgctttgggatccgatcaaactcctcccct
ctgcaacagatgacatttgaaaccagcttccagtttctgaagcaggccaccatgctggga
tcgcacgatgagctgaggtccccttccgcctgcctcgtggtcgggaaagtcgtccggggc
gggacaggcctgttcgagctcaagcagcccctgagatag
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integrated database retrieval system
