Neomonachus schauinslandi (Hawaiian monk seal): 110587571
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Entry
110587571 CDS
T08474
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110587571 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsu03021
]
110587571 (CPSF3)
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110587571 (CPSF3)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110587571 (CPSF3)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110587571 (CPSF3)
U7-dependent histone pre-mRNA processing factors
110587571 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
110587571
NCBI-ProteinID:
XP_021553462
UniProt:
A0A2Y9HPE3
LinkDB
All DBs
Position
10:6769570..6813381
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSILSVTVDGKTANINLETRTVECEEGSE
EDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggaaagtgaccagctgctgatccgaccccttggagctggg
caagaagtaggaagatcatgtattatcctggagttcaaaggaagaaaaataatgttggac
tgtgggatccaccctggcctagaaggaatggatgctcttccttatattgatttaattgac
ccagctgagattgatctcctgttaattagtcatttccatttggatcactgtggagctttg
ccctggtttctacagaagacaagtttcaaaggaagaacatttatgactcatgctacaaaa
gctatttatagatggcttctttcagattatgtcaaagtcagtaatatatcagcagacgac
atgctgtatacagagacggatctggaagagagcatggacaaaattgaaaccatcaacttc
catgaagttaaagaagttgcaggaatcaagttttggtgttaccacgcaggccacgtccta
ggagctgccatgttcatgattgagatcgcgggcgtgaagctattgtacacaggtgatttc
tcaagacaagaagatagacacttaatggcagctgaaattcctaatattaaacctgatatt
cttattattgaatctacttatgggacccatatccatgagaagcgtgaagagcgagaagca
agattctgtaacactgttcatgacattgtaaacagagggggcagaggtctcattcctgtc
tttgctcttggaagggctcaggagctgctcttaattttagatgagtactggcagaatcac
ccagaactccatgatattcccatatactacgcgtcctctttggccaagaagtgcatggca
gtataccagacgtatgtaaatgccatgaatgacaaaatccgcaaacagatcaacatcaat
aatccctttgttttcaagcacattagtaacctcaagagcatggatcattttgatgacatt
ggccccagcgtcgtcatggcctccccaggcatgatgcagagcggcttatccagagagctc
tttgaaagctggtgcacggataagaggaacggcgtcattatagcagggtactgtgtggaa
gggacgcttgccaagcatatcatgtctgagccagaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtctgttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggagaa
cagaatgaaatggccagattgaaagcagccctgattcgagaatatgaggacaacgatgaa
gttcacatagaggttcataatcctcggaatacagaagctgtgaccttgaatttcagagga
gaaaagctagccaaggtcatgggctttttagcagacaagaaaccagaacaaggccagcgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgtgatctc
tccaattatactgacttggccatgagcactgtgaaacagacccaagccattccctatacc
ggtccttttaatttgctctattaccaactacagaaattgacaggtgacgtggaagaatta
gaaattcaagaaaaacctgctctgaaagtattcaaaaatatcactgtcatacaggagcca
ggaatggtggtattagaatggctggcaaacccttccaatgacatgtatgcagacacagta
acaaccgtgatactggaagtccagtccaacccgaagataaggaaaggtgcagtacaaaag
gtttctaaaaaattagaaatgcacgtttatagcaagaggctggagatcatgctccaggac
atatttggagaagactgtgtaagtgtaaaagatggttctattctcagtgtcacagtggac
gggaaaactgctaatataaacttggagacacggactgtagaatgcgaagaagggagcgag
gaagacgaatccctgcgggaaatggtggagctggccgcacagaggctgtatgaggccctc
acccccgttcactga
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