Neomonachus schauinslandi (Hawaiian monk seal): 110587701
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Entry
110587701 CDS
T08474
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nsu04515
]
110587701 (PCDH17)
Cell adhesion molecules [BR:
nsu04515
]
Cadherins
Protocadherins
110587701 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Cadherin_4
NUC153
PepSY
Motif
Other DBs
NCBI-GeneID:
110587701
NCBI-ProteinID:
XP_021553584
UniProt:
A0A2Y9HUL9
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Position
3:complement(47233879..47324915)
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AA seq
1162 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGGGVGGG
RSKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICM
IKVEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHG
LFALDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSN
DNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSID
PKTGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVR
QGALSEAAQPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEEN
YDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLY
VLQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYAL
RSFNYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQV
PRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTP
VVELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISI
ILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEER
NAMNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFT
GQGTNASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQ
ADSDQDTNKGSCCDMSVREALKMKTTSAKSQPLEQEPEECINCTDECRVLGHSDRCWMPQ
FPAANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKP
YLKAKRALSPLLQEVPSASSSPTKACMEPCPSTKGSLDGCEAKPGALAEASSQYLPTDSQ
YLSPSKQPRDPPFMASDPMARVFADVHSRASRDSSEMGAVLEQLDHPNRDLARESVDAEE
VVREIDKLLQDCRGNDPVAVRK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgtttcctcctatgggcccctgccctgacgctcaaaaac
ctcaactactcggtgccggaggagcaaggggccggcaccgtgatcggcaacatcggcaag
gatgctcgactgcagccggggcttccgcccgcagagcgcggtggcggtgtcggcggcggg
cgaagcaagtcgggtagctaccgggtgctggagaactcagcaccgcacctgctggacgtg
gacgcggacagcgggctcctctacaccaagcagcgcatcgaccgtgagtccctgtgccgc
cacaacgccaagtgccagctgtccctcgaggtgttcgccaacgacaaggaaatctgcatg
atcaaggtggagatccaggacatcaacgacaacgccccctccttcccctcggaccagatt
gagatggacatctcggagaacgcggcgccgggcacccgcttccctctcaccagcgcacat
gacccggacgccggcgagaacgggctccgcacctatctgctcacgcgcgacgaccatggg
ctcttcgcgctggacgtcaagtcccgcggcgacggcaccaaattcccagagctggttatc
cagaaggcgctggaccgcgagcaacagaaccaccacacgcttgtgctgaccgccctggac
ggcggcgagccgccacgatcggccactgtgcaaatcaacgtgaaggtgatagactctaac
gacaacagccctgtcttcgaggcgccctcctacttggtggagctgccagagaatgcccca
ctgggcaccgtggtcattgatctgaatgccaccgacgccgacgagggtcccaatggtgaa
gtactctactccttcagcagctatgtgcctgaccgcgtaagagagctcttctccatcgac
cctaagaccggcctgatccgtgtcaagggcaacctggactatgaggagaatgggatgctg
gagatcgacgtacaggcccgagacttggggcccaaccccatcccggcccactgcaaggtc
actgtcaagctcatcgaccgcaacgacaacgcgccgtccatcggtttcgtctccgtgcgc
cagggggcgctgagcgaggccgcccagcccggcaccgtcatagctctagtgcgggtcact
gaccgggactcgggcaagaacgggcagctgcagtgccgggtactcggcggaggggggacg
ggcggcggcggcggcctgggagggcccggaggttctgtgcccttcaagcttgaggagaac
tacgacaacttctacacggtggtgacggaccgccctctggaccgcgagacacaggacgag
tacaacgtgacaatcgtggcgcgggacgggggctcgcctcctctcaactccaccaagtcg
ttcgctgtcaagattctggacgagaacgacaacccccctcgtttcaccaaaggactctat
gtgctgcaggtgcacgaaaacaacatcccaggagagtacctgggctcagtgctcgcccag
gaccccgacctgggccagaacggcacagtgtcctactcgatcctgccttcgcacatcggc
gacgtgtccatctacacctatgtgtctgtgaaccccaccaacggggccatctacgccctg
cgctcctttaactacgagcagaccaaggcttttgagttcaaggtgctcgctaaggactcg
ggggcgcccgcgcacttggagagcaacgcaactgtgagggtgacggtgctagacgtgaat
gacaacgcgccggtgatcgtgctgcccacgctgcagaacgacacagctgagctgcaggtg
ccgcgcaacgccggcctgggctacctggtgagcaccgtacgcgcccttgacagtgacttc
ggcgagagtgggcgcctcacgtacgagatcgtagacggaaacgacgaccacctgtttgaa
atcgatccctccagcggcgagatccgcacgctgcaccccttctgggaggacgtgacgccg
gtggtggagctggtggtgaaggtgactgaccacgggaagcccaccctgtccgcggtggcc
aagctcatcatccgctcggtgagcggctccttgcccgaaggggttccccgggtaaacggc
gagcagcaccactgggacatgtcgctgccgctcatcgtgactctgagcactatctccatc
attctcctagcggccatgatcaccattgccgtcaagtgcaagcgcgagaacaaggagatt
cgcacctacaactgccgcatcgccgagtacagccacccgcagctgggcgggggcaagggc
aagaagaaaaaaatcaacaaaaatgacattatgctggtgcagagcgaggtggaggagagg
aacgccatgaacgtcatgaacgtggtgagcagcccctccctggccacctcccctatgtac
ttcgactaccagacccggctgcccctcagctcgccccggtcggaggtgatgtatctcaaa
ccggcctccaacaacctgactgttcctcaggggcacgcgggctgccacaccagcttcacg
ggacaagggactaatgcaagcgagacccctgccactcggatgtccataattcagacagac
aattttcccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctcc
acgtttaaggacccagaaagagccagcctgagagacagtgggcacggggacagtgatcag
gctgacagtgaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggca
ctcaagatgaaaacgacttcagctaaaagccaaccacttgaacaagaaccagaagagtgc
attaattgcacagatgaatgccgagtgcttggtcattctgacaggtgttggatgccgcag
ttccctgcagccaatcaggctgaaaatgcagattaccgcacaaatctctttgtacccaca
gttgaagctaatgttgagactgagacttacgaaactgtgaaccccactgggaaaaagact
ttttgtacatttggaaaagacaagcgagagcacactattctcattgccaatgttaaacct
tatttaaaagccaaacgtgccctgagccctctcctccaagaggtcccctcagcatcaagc
agcccaaccaaggcatgcatggagccttgcccctcaacaaaaggctctctggatggttgc
gaagcaaaaccaggagccctggccgaagcaagcagccaatacttgcccactgacagtcag
tatctgtcacccagtaagcaaccgagagaccctccattcatggcttccgatccgatggca
agggtctttgcagatgtgcattccagagccagccgggattccagcgagatgggcgctgtt
cttgagcagcttgaccaccccaacagggatctggccagagaatcggtggatgcggaggaa
gtcgtgagagaaattgataagcttttgcaggactgccggggaaatgaccccgtggctgtg
agaaagtga
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