Neomonachus schauinslandi (Hawaiian monk seal): 110587806
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Entry
110587806 CDS
T08474
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 17-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110587806
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsu02000
]
110587806
Transporters [BR:
nsu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110587806
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
RsgA_GTPase
AAA_23
AAA_25
SRP54
Motif
Other DBs
NCBI-GeneID:
110587806
NCBI-ProteinID:
XP_044771189
UniProt:
A0A8M1MJY4
LinkDB
All DBs
Position
5:139198488..139259174
Genome browser
AA seq
1747 aa
AA seq
DB search
MTMGGNLKLLLWKNFILKKRMTLVTMLEILAPLLFSTIVMYLHLNSLPKKRPPLNYLAIN
ISXLPDFFYVPMQTRYQLVYIPSKSRTLKAIMEMEKSFDIEFEVLGYSSVPVSESYIIQD
PKAFYMWAGIVLNHHFNDSKQPLPLEIKYHLRLSCIQRNSLISKVTTYHDKLEGWGTSLL
YPPNPSQVPRAFGHFDGGLPGYSKGGFLTLQHALDKAIMQHHAHNVMTQLFKNLTVLVKR
FPHGAYIQDTFLLILQNEFPLLLMLSFIGIQLIIINSVVLEKEKKLKEYMCMMGVNNWQH
WAAWFTMFFISALMVVSFMTVLFCTQVNGVMVFRNSDPSLIFVFLLCFAIATIFFAFMIS
TFFQRAHVATAAGGILFFFTYLPYLYLTFSYRQRTHFQKVAFCLLSNVAMALGVRLISAF
EIKGTGMRWKNIGSMRGEFNFSQVLLLLLLDSVLYSVVAWCMEAVLPGQCGVPKPWYFFV
MVSASAISVSLTLAPGKFFQEEPTNLVKGIEIQHLYKVYHMGKNKHRAVKDLTMNLFXGQ
ITVLLGHNGAGKTTTCSQTLAYVLHLLLGLIPPSGGWAYVNGYEISRDMAEVQRSLGWCP
QHDILFENLTVAEHLYFYAQLKGLSRQKCPEEVQRMLHVLGLEDKQDSLSRFLSAGMKRK
LSIGIALIAGSKVLMLDEPTSGMDAISRRAIWDLLQQHKSDRTVLLTTHFMDEADLLGDR
VAIMAKGELQCCGSSLFLKQKYGATYYMTLVKKPQCSTEKISHLVYQHRPSAVLQSSTGE
ELTFILPKKSMHRFASLFTELELRQMELGIASFGAAVTTMEEVFIRVNKLSDTNTDIQAL
KIPSMQSQQRVPNSRIKRIHSRIFSIQSGLPIQLNTGLSLICQQFYAMFLKRVTYSWRNW
MLMLTIQVLAPLAITIFSLAFLNLETLMDEVPLELTLKTYRQTIVPFYISPNSRLGPQLS
EHFTNTLVAEEQIPLETLSSVEDLLLQKAEEEPEGFDYKYVLAASFEDLGNHTTVTALFN
NQAYHSPAVALALMDNFLFKLLSGARASITVVNHPQPRSALEASEDILHQGLKAHFLIIN
LLFGMAFLSSSFSILTVKERSTKAKHVQFASGVYVATFWLSALLWDLVTSLVPSLLLLLR
AVVFLYHKEEAFTHEDNVPAFILALMLYSWATILFIYLTSFCFHYKGSAFVKLIITLTFL
SISPLILILVTSEKEMGYTMVSDSLDHVLLMPGHCLGKALFNLYYSYRMQKLCKTRNLDY
WECSQISEGYTVQESVYAWESLGTGKYLTALVISGFVYLILLFLVETNVLWELKARFSDF
NRKRQQVSMHGVASVPVDQDVVQDAKVVETNLEKLREENPLVLREVSKVYAEKVPLLAVN
KISFTVQAGECFGLLGINGAGKTSIFKMLTGEEPITSGDAFVRGLSIRSHLREVRQWVGY
CPQFDALFNHMTGRETLVVYARIRGIPESHIGACVEQILDSLLTYAYADKLVKTYSGGNK
WKLSTGIALLGEPSVIFLDEPSTGMDPVARRLLWDTVARARESGKAIVITSHSMEECEVL
CTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKVRCDGQQEALEEFKAFVNLTFPGSVL
EDEHQGMVHYHLPGDDLSWAKVFDILEQAKMMFMLDDYSINQVSLEDIFLSFTCSVHPTK
EEHQQGQAEPADHSSTSPPPSQPPSPLPSQPPSLLPSPSVTTSLRRFLVVIKSAEPAIGC
KEYKGSL
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgggcgggaatctgaaacttcttctgtggaagaatttcatcttgaagaagcgg
atgaccctggtcaccatgctagagatcctggcgccactgctgttctccacgattgtcatg
tatcttcacctgaacagtctgcccaaaaaaaggcctcctttgaactaccttgcgatcaac
atcagttagctgccagacttcttctatgtccccatgcagactaggtaccagctagtgtac
atcccttccaagagcaggacgttgaaggctatcatggaaatggagaaatcctttgacatt
gagtttgaagttctaggctattcttcggtgcccgtctctgaaagttacataatccaggac
cccaaagccttctacatgtgggccggaattgtcttgaatcaccacttcaatgacagcaag
cagcccctgccgctggagatcaaataccacctgcgcttgagctgcattcagaggaactcc
ttaatctcgaaggtgacaacataccacgataagctagaaggctggggcacatccctcctt
tatcctccgaacccgagccaagtgccccgggcctttggacattttgacgggggactccct
ggatacagcaagggaggcttcctgaccctacagcatgctctggacaaggccatcatgcag
caccacgcccacaatgtgatgacccaactgttcaagaacctcactgtgcttgtgaagagg
ttcccgcatggagcctacatccaggacacgttcttgctgatccttcagaacgagttccct
cttctgctcatgctcagcttcatcggcatccagctcatcatcatcaattctgttgtcctg
gagaaagagaaaaagctgaaggagtatatgtgcatgatgggagtgaacaactggcaacac
tgggctgcctggttcaccatgttcttcatctccgccctcatggtcgtctctttcatgact
gtcctcttctgcacgcaggtgaacggtgtgatggtgttcagaaacagcgaccctagcttg
atattcgtttttctactgtgttttgccattgccacaattttctttgcattcatgatcagc
acattcttccaaagagcccacgtagcaactgctgctggaggcatcctcttcttcttcacc
tacctcccatacctgtacctcacgttcagctaccgccagaggacccacttccaaaaggtg
gccttctgtctgctctcgaacgtcgccatggcactgggagtccgattaatctccgcgttt
gagataaaaggcacaggcatgcggtggaagaatatcggcagcatgaggggggagtttaac
ttctcccaggtgctgctgctgcttctgctggactccgtcctgtacagcgtggtggcctgg
tgcatggaggccgtgctcccggggcagtgcggtgtacccaagccctggtacttctttgtc
atggtgagtgccagcgctatctcagtatctctgactcttgcccctggcaagttctttcag
gaagagcctaccaatttggtgaaagggattgaaatccaacatctctacaaggtgtatcac
atgggaaagaataaacacagagcagtcaaagatctgaccatgaatctattctaggggcag
atcactgtcctcctgggacacaacggagccggcaaaaccaccacgtgctcacagacctta
gcatatgtcttgcacttgctcctaggtcttattcctccttcaggtggatgggcctatgtc
aatggatatgaaatttcacgcgatatggctgaggtccagaggagcctgggctggtgcccc
cagcacgacatcttgtttgaaaacctcacagtagcagagcatctttatttctatgctcag
ctgaagggcttgtcccgtcagaagtgccctgaagaagtccagcggatgctgcacgtcctc
ggtctggaggacaagcaggactccctgagccggttcctgagcgcgggcatgaagcgcaag
ctctccatcggcatcgccctcatagcgggctccaaggtgctgatgctggacgagcccacc
tcgggcatggatgccatctccaggagggccatctgggacctcctgcagcagcacaagagt
gaccgcaccgtgctgctgaccacgcacttcatggacgaggctgacctgctgggggaccgc
gtggccatcatggccaagggggagctgcagtgctgcgggtcctcgctgttcctcaagcag
aagtatggtgccacatactacatgactttagtgaagaaacctcagtgcagcacagagaag
atttctcatctggtttatcaacacagaccaagtgcggttttgcagtccagcactggagaa
gaattaacatttattcttcctaaaaagagcatgcacaggtttgcatctctatttaccgag
ctggaactgaggcagatggagctggggatcgccagctttggggccgcggtcaccaccatg
gaggaggtcttcattcgggttaacaagttgtcagacaccaacacagatatccaagccctc
aagatcccctcgatgcagtcccaacaaagagtacctaacagcaggattaaacgcattcac
tccaggatcttctcaatacagtcgggcctgccaatccagctgaacactgggctcagcctt
atctgccaacagttctatgccatgttcctgaaaagggtcacatactcttggcgcaactgg
atgctgatgctaacaatacaggtcctggcacctctggcgatcaccatcttcagccttgcc
ttcctcaacttggaaacgcttatggacgaggtcccactggaactgaccctaaaaacatac
cgtcaaaccattgtcccattctatatttctcccaattccaggctgggtcctcagctttcg
gaacattttacaaacacgcttgtggctgaggagcagatccctctggagactctgagctcg
gtggaggacctcctcctacaaaaggcagaggaggagcccgagggctttgattacaaatac
gtcctggcggcttcctttgaagacttggggaaccacaccacagtgactgcgctcttcaac
aaccaggcataccactcccccgccgtggcactggcgctcatggacaactttctcttcaag
ctgctctctggggccagagcctccatcacagtggtcaaccaccctcaaccccggtcggcc
ctggaggcctcggaggatatcttgcatcagggcctgaaagcacactttctcattatcaac
ttgcttttcggaatggctttcctgtccagctccttttccatcttgacagtcaaggagcga
tccacgaaggccaagcacgtccagtttgccagcggtgtttacgtggctactttctggctc
tccgcactgctgtgggacctcgtcacctccctcgtccccagtctgctgctgctgctgagg
gctgtggtgtttctgtaccacaaggaagaagcttttacgcatgaggacaacgtcccagcc
tttatcttggcgctcatgctctacagctgggctaccatcctcttcatctacctgaccagc
ttctgctttcactacaaaggcagcgcttttgtcaagctcatcatcacactcaccttcttg
agcatcagccccctcattctcatcttagtcacaagcgaaaaagagatgggctacacaatg
gtgtcggactccttggaccacgttctactgatgccaggccactgcctgggaaaggccctc
ttcaacttatactacagctacagaatgcagaagttgtgcaaaaccaggaacctggactac
tgggagtgtagtcaaatttcagagggatacaccgtccaggagagcgtctacgcctgggag
tctctcgggacggggaagtatctgacggccctggtcatctcggggtttgtgtacctcatc
ctgctattcctcgttgaaaccaatgtcttgtgggagctgaaagccaggttttctgacttc
aacaggaagcgacaacaggtgtcgatgcacggcgtagcgtccgtgcccgtagaccaagat
gtggtgcaggacgcaaaggtggtggagactaacttggaaaagctgcgcgaggagaaccca
ctggttcttagagaagtgtcaaaggtctatgcggagaaggtgcccctgctggctgtgaac
aagatctccttcactgttcaagcaggggagtgcttcggccttcttggcatcaacggagcc
gggaaaacgtccatcttcaaaatgctgactggggaagagcccatcacctctggggatgcc
tttgtcaggggcctcagcatccgctctcacctgagggaggtgcggcagtgggtgggctac
tgcccccagtttgacgccctgttcaaccacatgacgggccgggagacgctggtggtgtac
gcccggatccggggcatccccgagagccacatcggcgcctgtgtggagcagattcttgac
agcttactcacgtatgcgtacgcggacaagctggtgaagacttacagtggtggcaacaag
tggaagctgagcacaggcatcgccctgcttggagagccttcggtcatcttcctggacgag
ccatccactggcatggaccccgtggcccggcgcctgctctgggacactgtggcacgggcc
cgagagtcgggcaaggccatcgtcatcacctcccacagcatggaggaatgcgaggtcttg
tgcacccggctggccatcatggtgcagggtcagttcaagtgcctgggcagcccacagcac
ctcaagagcaagtttggcagcggctactccctgcgggccaaggtccggtgcgatgggcag
caagaggcgctggaggagttcaaggcgtttgtgaacctgaccttcccaggcagcgtcctg
gaagatgagcaccaagggatggtccactaccacctgcccggggatgacctcagctgggcc
aaggtatttgacattctggagcaagccaagatgatgttcatgctggacgactactccatc
aaccaagtctccctggaggacattttcctaagcttcacctgctctgtgcacccaaccaaa
gaggaacaccaacaagggcaagcagagccagcagaccattcatcaacctctccacctccc
tcccagcctccctctccacttccctcccagcctccctctctacttccctccccctccgtc
accacttccctcagacgtttccttgttgtaataaagagtgcagaacctgccataggctgc
aaggagtacaaaggcagtctgtag
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integrated database retrieval system
