Neomonachus schauinslandi (Hawaiian monk seal): 110587829
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Entry
110587829 CDS
T08474
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04612
Antigen processing and presentation
nsu05145
Toxoplasmosis
nsu05152
Tuberculosis
nsu05164
Influenza A
nsu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
110587829 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110587829 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
110587829 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
110587829 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
110587829 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nsu01001
]
110587829 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nsu04054
]
110587829 (CIITA)
Enzymes [BR:
nsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110587829 (CIITA)
Protein kinases [BR:
nsu01001
]
Serine/threonine kinases: Other
TAF1 family
110587829 (CIITA)
Pattern recognition receptors [BR:
nsu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110587829 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
110587829
NCBI-ProteinID:
XP_044771004
UniProt:
A0A8M1MJE8
LinkDB
All DBs
Position
5:145866017..145888052
Genome browser
AA seq
1109 aa
AA seq
DB search
MELGSLEGGYLELLNSSADPLQLYHLYDQTDLAREEIELCSEPDMDTINCEQFSKLLCDM
EGDEETREAYANIAELDQYVFQDSQLDGLGKDIFIEHIGLEEMISESVEVLEEAGQKSQK
RPFPEELPVDLKHRKLAEPLTVPMVTGTFMVGSVSDSAALPYLSPPAVFNKEPASSQIWL
EETVLMPVPPSSSLLSCPSLPAGRIQIIPGLPSLPQGLWQISGAGTGVSGMVIYQGEMPQ
ASQVLPSSGPAVQSLPKFPDRPGSTSPFAPSAADLPGMPEPALTSRANTTEDQMSPTQSR
AAHEVSSKPLKWPESVEQFCGSLRDKYQAELAGPEGILVEVELVKARLERSSGKNQEREL
ATPDWAERQLARGGLAEVLGAAGDCRRPRETQVIAVLGKAGQGKSRWAREVSRAWACGQL
PQYDFVFYFPCHCLDRAKGDTYRLQDLLFCLGPQPRPVDEEVFRHILRRPDRVLLILDAF
EGLEAQDGLLHSAGGPVSTEPHSLRGLLAGLFQRKLLRGCTLLLTARPWGRLAQSLSKAD
VLFEVAGFSAEQAKTYVTRYLERTGATACQERALALLRGQPFLLSLSHSPTVCRAVCRLS
EALLQLGDKAELPSTLTGLYVGLLGPAARDSPPEALAGLARLAWELGRRHRGTLQDSQFP
SAAVRAWAVAKGLVQPVPGAPDVELAFSSFLLQCFLGAVWLALSTEIKDKELPQYLALTP
RKKRPYDNWLEGVPRFLAGLLFQPHADCLGALAGPAAAAVGARKQKVLSRYLKGLQPGTL
RAGRLLELLHCAHEAADAAIWQHVVQGLPARLSFLGTRLTPPNTYVLCSALAAAGQDFSL
DLRSTGIDPAGLGSLVGLSCVTHFRASLSDMVGLWESLQQRGETKLLRAVEEKFTIEPFK
AKSPKDVEDLGNLVQIQRTRNSSEDTAGELPAVRDLKKLEFALGSVLGPQAFPKLVRILE
AFSSLQHLDLDSLSENKIGDEGVEQLSATFPRLRALETLNLSQNSITDVGACKLAEALPS
LAASLLRLSLYNNSICDMGAESLAHVLPDMVSLRVLDVQYNKFTAAGAQQLAASLRKCPH
VETLAMWMPTIPFGVHEHLQQLDSRISLR
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggagttggggtctctagaaggcgggtacctggagcttctcaacagcagtgccgatccc
ttgcagctctaccacctctatgaccagacggacctggctagagaagagattgagctctgc
tcagaacccgacatggacaccatcaactgcgaacagttcagcaaactgttgtgtgacatg
gaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtacgtg
tttcaggactcccaactggatggtctgggcaaagacattttcatcgagcacataggattg
gaagaaatgatcagcgagagtgtcgaggtgctggaggaagcagggcagaaaagtcagaaa
agacccttcccagaggagctgcccgtggacttgaagcacaggaagctggctgagcccctc
actgtgcccatggtgactggcacgttcatggtcgggtcagtgagtgactccgcagctctg
ccctacctgtcaccacctgctgtgttcaacaaggagccagcatccagccagatctggctg
gaggagaccgtcctgatgcctgtgcccccttccagttccttgctgagctgcccgagtctt
cctgctggacgcatccagatcatccctggcctcccctctctgccccaggggctctggcaa
atctcaggggctgggacgggggtgtctggtatggtcatttatcaaggcgagatgccccag
gccagccaagtgcttccttccagtggcccagctgtgcagagcctccccaagttcccagat
cggcccggctccaccagcccctttgccccgtctgcagctgaccttcctggaatgccagaa
ccagccttgacctcccgtgcaaatacgacagaggaccagatgtcccctacccaaagccgg
gcagctcacgaggtctccagcaagcctctgaaatggcctgagagtgtggagcagttctgc
ggctccctacgggacaagtaccaggctgagctcgccggcccggaaggcatcctggtggag
gtggagctggtgaaagcacggctggagaggagcagtggcaaaaaccaggagagggagctg
gccaccccggactgggcagagaggcagttggcccgcgggggtctggccgaggtgctgggg
gctgccggggactgccggcggccgcgggagacacaggtgatcgccgtgctgggcaaagca
ggacaggggaagagccgttgggcccgggaagtgagccgggcctgggcctgcggccagttg
ccccagtatgacttcgtcttctacttcccctgccactgtttggaccgcgccaaaggggac
acttaccgcctgcaggatctgctcttctgcctgggcccccagccacggcctgtggacgag
gaggtcttcagacacatcttgaggcggcccgaccgggttctgctcatcctggacgccttc
gaggggcttgaagcccaagacggcctcttgcacagcgcgggtggacccgtgtccacagag
ccccactccctccgcgggctgctggccggactcttccagcggaagctgcttcgaggctgc
accctgctgctcacggcccggccctggggccgcctggcccagagcctgagcaaggccgac
gtcctgttcgaggtggccggcttctcagccgagcaggccaagacctacgtgacgcgctac
ttggagcgcactggggcgactgcgtgccaggagcgagccctggccctcctccggggccag
ccgttcctgctcagcctcagccacagccccaccgtgtgccgggccgtgtgccggctctcc
gaggccctcctacagctgggtgacaaggctgagctgccctccacgctcacgggactctac
gtgggcctgctgggccccgcagcccgcgacagccccccggaggccctggcaggactggcc
aggctggcctgggagctgggccgcagacaccggggcaccctgcaggacagccagttccca
tcggccgccgtgagggcctgggccgtggccaaaggcctggtgcagcccgtcccgggcgcc
ccagacgtggagctggccttctccagcttcctcctgcagtgcttcctgggggccgtgtgg
ctggccctgagcactgaaatcaaggacaaggagctgccgcagtacttggcgttgaccccg
aggaagaagaggccctatgacaactggctggagggtgtgccgcgcttcctggctggcctg
cttttccagcctcacgccgactgcctcggagccctggcagggccagctgcggccgccgtg
ggggccaggaagcagaaggtgctcagcaggtacctgaagggcctgcagccagggacgctc
cgggccgggcggctgctggaactgctgcactgtgcgcatgaggccgcggacgccgcgatc
tggcagcacgtggtgcaggggcttccagcccgcctctccttcctgggcacccggctcaca
ccacccaacacctacgtgctgtgcagtgccttggcggcggccggccaagacttctccctg
gacctccgcagcactggcattgaccccgctgggctggggagcctcgtgggactcagctgc
gtcacccatttcagggcttcgctgagtgacatggtggggctgtgggagtctctacagcag
cgtggggagaccaagctgctccgggcagtggaggagaagttcaccatcgagcctttcaag
gccaagtccccgaaggatgtggaagacctcggcaacctcgtgcagatccagaggacaagg
aattcctcagaagacacagctggagagctccctgctgtccgggatctaaagaagctggag
tttgcgctgggctctgtcttaggcccccaggcttttcccaaactggtgaggatcctcgag
gccttttcctcccttcagcatctggacctggactcgctgagtgagaacaagatcggggat
gagggtgtcgagcagttgtcagccaccttccctcggctgagggccctggagactctcaac
ttgtcccagaacagcatcaccgacgtgggcgcctgcaagctcgccgaggccctgccctcc
ctggctgcgtccctcctcagactgagcctgtacaataacagcatctgtgacatgggagct
gagagcctggcacacgtgcttccagacatggtgtccctccgggtgttggatgtccagtat
aacaagttcacggctgctggggcccagcagctagctgccagcctgagaaagtgccctcat
gtggagacactggcgatgtggatgcccaccatcccgtttggtgtccatgaacacctgcag
cagctagactcacggatcagcctgagatga
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