Neomonachus schauinslandi (Hawaiian monk seal): 110588072
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Entry
110588072 CDS
T08474
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110588072 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110588072 (GSPT1)
03012 Translation factors [BR:
nsu03012
]
110588072 (GSPT1)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110588072 (GSPT1)
Translation factors [BR:
nsu03012
]
Eukaryotic type
Release factors
110588072 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
110588072
NCBI-ProteinID:
XP_021554035
UniProt:
A0A2Y9HXD8
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Position
5:complement(146597700..146637432)
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AA seq
642 aa
AA seq
DB search
MDPGSGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGGPLAAAAAAATEAQ
REHLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQQPPPPSGAATPNHGAGSGAGGP
PAPLESSQDEQSLLCEGSNSAVSMELSEPVVENGETEMSPEESWEHKEEISEAELGGGSL
GDGRPPEENAQEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYL
TGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTIL
DAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIV
LINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCP
WYTGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPN
KHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQI
VIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARL
RTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagtggcggtggtggcggcggcggcggcgggagcagcagcggcagcagc
agcagcgactcggcgcccgactgctgggaccaagcggacatggaagcccccgggccgggc
ccgtgtggcggcggcggcggccccttggcggcggcggcggcggcggcgaccgaggcccag
cgtgagcacctcagtgcggccttcagccggcaactcaacgtcaacgccaagcccttcgtg
cccaacgtccacgccgccgagttcgtgccgtccttcctgcggggcccggcccagcagccg
ccgcccccatctggcgccgccacccccaaccacggagccggcagcggcgcgggaggccct
ccggcacctctggaatcttctcaagacgaacagtcattgttgtgtgaaggttcaaattca
gctgttagcatggaactttcagaacctgttgtagaaaatggggagacagaaatgtcccca
gaagaatcatgggagcacaaagaagaaataagtgaagcagagttagggggtggttccttg
ggagacggaagacccccagaggagaacgcccaagaaatgatggaggaggaagaggaaata
ccaaaacctaaatctgtggtcgcaccccctggggctcctaaaaaagaacatgtaaatgtc
gtattcattgggcatgtagatgctggcaagtcaaccataggaggacaaataatgtatttg
actggaatggttgacaaaaggacacttgagaaatatgaaagagaagctaaagagaaaaac
agagaaacttggtatttatcttgggccttagatacaaatcaggaagaacgagacaagggt
aaaacagtagaagtgggccgtgcctattttgaaacagaaaagaagcatttcacaattctg
gatgcccctggccacaagagttttgtcccaaatatgataggtggtgcttctcaagctgat
ttggctgtattggtcatctctgcaaggaagggagagtttgaaactggatttgaaaagggc
ggacagacgagagaacatgcaatgttggcaaagacagcaggtgtgaagcacttgattgtg
cttattaataagatggatgatccaacggtcaattggagcaatgagagatatgaagaatgt
aaagagaaactagtgccatttttgaaaaaagttggcttcaatcccaaaaaggacattcac
tttatgccctgctcaggactgactggagcaaatcttaaagagcaatcagatttctgtcct
tggtacactggattaccgtttattccctatctggataatttgccaaacttcaatagatca
gttgatggaccaatcaggctgccaattgtggataagtacaaggatatgggcactgtggtc
ctgggaaagctggaatcaggatctatttgtaaaggccagcagcttgtgatgatgccaaac
aagcacaatgtagaagttcttggaatcctttccgatgatgtagaaactgattctgtagcc
ccaggtgaaaacctcaaaatcagactgaaaggaattgaagaggaagagattcttccagga
ttcatactttgtgatcctaataatctttgtcattctggacgcacatttgatgcccagata
gtgatcatagagcacaaatccatcatctgcccaggttataatgcggtgctgcatattcac
acctgtattgaggaagtcgaaataacagccttaatctgcttggtagacaaaaaatcagga
gaaaaaagtaagactcgaccccgttttgtgaaacaagatcaagtatgcatcgctcgcttg
aggacagcgggaaccatctgccttgagacctttaaagacttccctcagatggggcgcttt
accttaagagatgagggtaaaaccattgcaattggaaaagttctgaaactggttccagag
aaagactaa
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