Neomonachus schauinslandi (Hawaiian monk seal): 110588230
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Entry
110588230 CDS
T08474
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsu03009
]
110588230 (DDX54)
Enzymes [BR:
nsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110588230 (DDX54)
Ribosome biogenesis [BR:
nsu03009
]
Eukaryotic type
Pre-60S particles
Helicases
110588230 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Cob_adeno_trans
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
110588230
NCBI-ProteinID:
XP_021554200
UniProt:
A0A2Y9HXW4
LinkDB
All DBs
Position
14:82142197..82161316
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AA seq
876 aa
AA seq
DB search
MAAGTRPAAGPRSRAAMAQWRKKKGLRKRRGAASQARSSDSEDGEFEIQAEDDARAQKLG
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALVLSPTRELAL
QTMKFTKELGKFTGLRTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDAKLNEQLKTSFFLVREDTKAAVLLHLLRTVVRPQDQTVVFVATKHHAEYISELLTT
QGVSCAHIYSALDQTARKINLAKFTHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTPARPREGSSGTVSVDGVL
GRVPQSVVDDEEGGLQSTLVASLELRGLGRVADNAQRQYVRSRPAPSPESIKRAKELDLA
GLGLHPLFSSRFEEKELQRLKLVDSIKNYRSRATIFEINASSRDLSSQVMRAKRQKDRKA
IASFQQGRQGRQEDTAGPAPGCPAPQEEKPEEEEAAGESVEDVFTEVMGRKRPQPGPDRG
AKRRREEARHRDQEFYVPYRPKDFDSERGLSVGGDGGAFEQQVAGAVLDLMGDEAQNLTR
GRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSEDE
GTSHQRGPERRGGKWGRGQGASQPRTPGAPAGRVRSELKTKQQILKQRRRAQKLRFLQRG
GLKQLSARNRRRAQELQRGAFGRGAHAKKGKMRKRM
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcacgcgcccagcggccggacctcggtcccgcgctgccatggcccagtgg
aggaaaaagaaggggctgcggaagcgccgaggcgcggcctcccaggcccgcagcagcgac
tcggaggacggcgagtttgagatccaggcggaagatgacgcccgggcccagaagctggga
cctggcagacccctgcccacgttccccacctcggagtgcacctcagacgtggagccggac
acgcgggagatggtacgcgcccagaacaagaagaagaagaagtccggaggcttccagtcc
atgggcttgagctacccagtgttcaagggcatcatgaagaagggctacaaggtgccaaca
cccatccagaggaagaccatcccggtgatcctggatggcaaggacgtggtggccatggcc
cggaccggcagcggcaagacggcctgcttcctcatccccatgttcgagcggctcaagacc
cgtagcgcccagactggggcccgcgccctcgtcctctcgcccacccgtgagctggccctg
cagaccatgaagttcaccaaggagctcggcaagttcacaggcctcaggaccgccctgatc
ctgggtggggacaagatggaagatcagtttgctgccctgcatgaaaatcccgacataatc
attgctacccccgggcgcttggtgcacgtggctgtggagatgaacctgaagttgcagagt
gtggagtacgtggtgttcgatgaggcagacaggctctttgagatgggctttgccgagcag
ctgcaggaaatcatcggccgcctccccgggggccaccagaccgtcctgttctctgccaca
ctgcccaaactgctggtggagttcgcccgcgcgggcctcacggagcccgtgctcatccgg
ctcgatgtagacgccaagctcaacgagcagctcaagacctccttcttccttgtgcgcgag
gacaccaaggctgccgtgctgcttcacctgctgcgcaccgtggtgcggccccaggaccag
acggtggtgtttgtggccacgaagcaccacgccgagtacatcagcgagctgctgacgacg
cagggggtgagctgcgcccacatctatagcgccctggaccagacggcccgcaagatcaac
ctcgccaagttcacccacggcaagtgctccgccctcatcgtgactgacctggcagcccgc
ggcctggacatcccgctccttgacaacgtcatcaactacagcttccctgccaagggcaag
ctcttcctgcaccgcgtgggccgcgtggcccgggctggccgaagcggcacagcctactcc
ttggtggccccagacgaggtcccctatctgctggacctgcacctgtttctcggccgcgcc
ctcactcctgcccgcccccgtgaggggtcctcaggcacggtcagcgtggacggcgtgctg
ggccgggtgccgcagagcgtggtggacgacgaggagggtggcctgcagagcaccctggtg
gcgtcactggagctacggggcctgggccgggtggctgacaacgctcagcggcagtacgtg
cgctcccggcctgcgccctcgcccgagtccatcaagagggccaaggagctggacctcgca
gggctgggcctgcaccccctcttcagctcgcgcttcgaggagaaggagctgcagcggctg
aagctggtagacagcatcaagaactaccgctcacgggcgaccatctttgagatcaacgcc
tccagccgggacctgagcagccaggtgatgcgtgccaagcggcaaaaggaccgcaaggcc
atcgccagcttccagcaggggcggcaggggcggcaggaggacacagctggccccgcccca
ggctgcccggcaccccaggaagagaagcccgaggaggaggaggcagcgggagagagtgtg
gaggatgtcttcacggaggtcatgggccggaagcggccgcagccgggacctgaccgggga
gccaagaggcggagggaggaggcccggcatcgggaccaggaattctacgtcccctaccgg
cccaaggacttcgacagtgagaggggcctgagcgtcggtggggacgggggggcattcgag
cagcaggtggctggcgctgtcctggacctgatgggggatgaagcccagaacctgaccagg
ggccggcagcagctcaagtgggaccggaagaagaagcggtttgtgggacagtcgggacag
gaggacaagaaaaagatcaagaccgagagtggccgctacatcagcagctcctacaaacgg
gacctctaccagaagtggaaacagaaacagaaaatcgatgatcgtgactcagaagacgaa
ggaacatcccaccagcgaggcccagagcgaagaggtgggaagtggggcagaggccaaggt
gcgtcccagccccgcaccccaggcgcccctgcaggccgcgtgcgctcagagctcaagacc
aagcagcagattctgaagcaacggcgccgagcgcagaagttgcgcttcctgcagcgaggg
ggcctgaagcagctctccgcccgcaaccggcgccgagcccaggagctgcagcggggcgcc
ttcggccggggcgcccacgccaagaagggcaagatgaggaagaggatgtaa
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