Neomonachus schauinslandi (Hawaiian monk seal): 110588631
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Entry
110588631 CDS
T08474
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu00100
Steroid biosynthesis
nsu01100
Metabolic pathways
Module
nsu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110588631 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nsu01006
]
110588631 (FDFT1)
Enzymes [BR:
nsu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
110588631 (FDFT1)
Prenyltransferases [BR:
nsu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110588631 (FDFT1)
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
110588631
NCBI-ProteinID:
XP_021554653
UniProt:
A0A2Y9HXR5
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Position
2:52903467..52965525
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AA seq
517 aa
AA seq
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MPEGPSVRKFHHLVSPFVGQQVVKTGGSSQKLNPASFQSLWLQDTQVHGKKLFLRFDPDE
ELGSLGNISLPESVEEGERKEEAQDQKQASGPSSQKISQQSSQSLELVAPSGESGVEHLR
GDMPAGGAERWLQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGEMRHAVCIFYLVLRALD
TLEDDMTISVEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVLEDFPTISLEFRNLAEKYQ
TVIVDICRKMGFGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASELEDPLVGED
IECANSMGLFLQKTNIIRDYLEDQREGREFWPQEVWSKYVKKLGDFAKPQNIDSAVKCLN
ELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQ
AVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSDPSSGKTRQIISTIRTQNLPNCQLISRS
HYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggaccatctgtgaggaagttccaccacttggtctccccctttgtggggcag
caggtggtcaagacagggggcagtagtcagaagctgaaccctgccagctttcagtccctg
tggctccaagacacccaggtccatggaaagaaattattccttagatttgatccagatgaa
gaactcgggtcccttggcaacatctcactgccagagtctgtagaagaaggagagaggaag
gaagaggctcaggaccaaaagcaggcctcggggcccagcagccagaaaatctctcagcag
tcctctcagtccctggagcttgttgctcccagtggagagagtggtgtggagcatttgcgg
ggagacatgcctgcaggaggtgctgaaaggtggctgcaggactcgctgagcagcagcttg
aaaacttgctacaagtatctcaatcagaccagtcgcagttttgcagctgtcattgaggcg
ctggatggggaaatgcgccatgcggtatgcatattttatctggtcctccgagctctggac
actcttgaagatgacatgaccatcagtgtagaaaaaaaagttccactgctacacaacttt
cattcttacctttatgaaccagactggcggtatatggagagcaaggagaaggatcgacaa
gtgctagaggacttcccaacgatctcccttgagtttagaaatttggctgagaaatatcaa
acagtgattgttgacatttgccggaaaatgggatttgggatggcggagtttttggataaa
cacgtaacatctgaacaggagtgggacaagtactgtcactatgtcgccgggctggtggga
attggcctttcccgtctgttctcagcctcagagttagaagaccccttagttggtgaagac
atagagtgtgccaattctatgggcctgtttctgcagaaaacaaacatcattcgtgattat
ctggaagaccagcgagaaggaagagagttttggcctcaagaggtttggagcaaatatgtt
aagaagttgggcgattttgctaagccacagaatattgactcggctgtgaagtgcctgaac
gaacttataaccaatgcactacaccacatcccagatgtcatcacttacctttcaagactt
agaaaccaaagtgtgtttaacttctgtgctattccacaggtgatggccattgccactctg
gctgcctgttataataatcagcaggtgttcaaaggcgtagtgaagatccgaaaagggcaa
gcagtaactctaatgatggatgccaccaatatgccggcggtcaaagctataatctaccag
tacatggaagagatttatcatagaatccccagctcagacccatcttctggcaaaacaagg
cagatcatctccactatcaggacacagaatcttcccaattgtcagctgatctcccgaagt
cactactcccctatttacctgtcatttgtcatgctcttggctgccctgagctggcagtac
ctgagcaccctgtcccaggtcacagaagactatgttcagaccggagagcactga
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