Neomonachus schauinslandi (Hawaiian monk seal): 110589225
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Entry
110589225 CDS
T08474
Symbol
BTRC
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 1A
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04114
Oocyte meiosis
nsu04120
Ubiquitin mediated proteolysis
nsu04218
Cellular senescence
nsu04310
Wnt signaling pathway
nsu04340
Hedgehog signaling pathway
nsu04390
Hippo signaling pathway
nsu04710
Circadian rhythm
nsu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110589225 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110589225 (BTRC)
04340 Hedgehog signaling pathway
110589225 (BTRC)
04390 Hippo signaling pathway
110589225 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
110589225 (BTRC)
04218 Cellular senescence
110589225 (BTRC)
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
110589225 (BTRC)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110589225 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsu04121
]
110589225 (BTRC)
03036 Chromosome and associated proteins [BR:
nsu03036
]
110589225 (BTRC)
Ubiquitin system [BR:
nsu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110589225 (BTRC)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110589225 (BTRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_DCAF12
F-box
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
F-box_5
WD40_2
DUF4508
PAN_3
Motif
Other DBs
NCBI-GeneID:
110589225
NCBI-ProteinID:
XP_021555398
UniProt:
A0A2Y9HUH4
LinkDB
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Position
6:127309781..127476892
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AA seq
605 aa
AA seq
DB search
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNGEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLASTAMKTENCVAKTKLANGTSSMIV
PKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDF
ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWR
GLAERRGWGQYLFKNKPPDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS
ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS
SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR
VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV
SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR
APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTY
TYISR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacccagcggaggcggtgctgcaggaaaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagaattcctcagagagagaagactgt
aataatggcgaaccccctaggaagataataccagagaagaattcacttagacagacttat
aacagctgtgccagactctgcttaaaccaagaaacagtatgtctagcaagcactgctatg
aagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagtatgattgtg
cccaagcaacgaaaactctcagcaagctatgagaaggaaaaggaactgtgtgtcaaatat
tttgagcagtggtcagagtccgatcaagtggaatttgtggaacatcttatatcccaaatg
tgtcattaccaacatgggcacataaactcgtatcttaaacctatgttgcagagggatttc
ataactgctttgccagctcggggtttggatcacattgctgagaacattctgtcatacctg
gatgccaaatcactatgtgctgctgaacttgtatgtaaggaatggtaccgagtgacatct
gatggcatgttatggaagaagctcattgagagaatggtcaggacagattctctgtggaga
ggcctggcagaacgaagagggtggggacagtatttattcaaaaacaaacctcctgatggg
aatgctcctcccaactctttttatagagcactttatcctaaaattatacaagacattgag
acaatagaatctaactggagatgtggaagacatagtttacagagaatccactgtcgaagt
gaaacaagcaaaggagtttactgtttacagtatgatgatcaaaagatagtaagcggcctt
cgagacaacacaatcaagatctgggataaaagcacgttggaatgcaagcgaattctcaca
ggccacacgggttctgtcctgtgtctccagtatgatgagagggtgatcataactggatca
tcggattccacggtcagggtgtgggatgtaaatacaggtgaaatgctaaacacgttgatt
caccattgtgaagcagttctgcacttgcgtttcaataatggcatgatggtgacttgctcc
aaagaccgttccattgctgtatgggatatggcctccccaactgacatcaccctccggagg
gtgctcgtcggacatcgagctgctgtcaatgttgtagactttgatgacaagtatatcgtt
tctgcatctggagataggactataaaggtatggaacacaagtacttgtgaatttgtaagg
accttaaatggacacaaacgcggcattgcctgtttgcagtacagagacaggctggtcgtg
agtggctcatctgacaatactatcagattatgggacatagaatgtggtgcatgtttacga
gtcttagaaggtcacgaggaactggtgcgctgtattcgattcgataacaagaggattgtc
agtggggcctacgatggaaaaattaaagtgtgggatcttgtagctgctctggacccccgt
gctcctgcagggactctctgtctacggacccttgtggagcattctggaagagttttccga
ctccagtttgatgaattccagattgtcagtagttcacatgatgacacaatcctcatctgg
gacttcctaaacgacccagctgcccaagctgaacccccccgctccccttctcgaacatac
acctacatctccagataa
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