KEGG   Neomonachus schauinslandi (Hawaiian monk seal): 110589261
Entry
110589261         CDS       T08474                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
  KO
K07573  exosome complex component CSL4
Organism
nsu  Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110589261 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsu03019]
    110589261 (EXOSC1)
Messenger RNA biogenesis [BR:nsu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     110589261 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     110589261 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 110589261
NCBI-ProteinID: XP_021555452
UniProt: A0A2Y9HV72
LinkDB
Position
6:complement(124055686..124062901)
AA seq 195 aa
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENGALPVISVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcgccacccgtgaggtactgcattccgggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggtacttacacccgacacggctacatcttttcgtcgcttgctggctgc
ctgacgaagagcagcgagaacggcgcgcttcctgtcatttctgtcatgagagaaacagag
tcccaattactaccagatgtgggggctattgtaacctgtaaggtctctagcatcaattcg
cgctttgccaaagtgcacatcctatatgtagggtccacaccacttaagaactcttttcga
ggaactatccgcaaggaagatgtccgagctactgaaaaagacaaggttgagatttataaa
agtttccgcccaggtgacattgtgttggccaaagtgatctccctgggtgatgcacagtcc
aactacctcctgaccactgctgagaacgaactcggggtggtggtcgcccacagtgaatca
ggtgtccagatggttcccattagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtggcccgagtacaacctgaattcttgcagacttaa

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