Neomonachus schauinslandi (Hawaiian monk seal): 110589261
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Entry
110589261 CDS
T08474
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110589261 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110589261 (EXOSC1)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110589261 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110589261 (EXOSC1)
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
110589261
NCBI-ProteinID:
XP_021555452
UniProt:
A0A2Y9HV72
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Position
6:complement(124055686..124062901)
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AA seq
195 aa
AA seq
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MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENGALPVISVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtgaggtactgcattccgggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggtacttacacccgacacggctacatcttttcgtcgcttgctggctgc
ctgacgaagagcagcgagaacggcgcgcttcctgtcatttctgtcatgagagaaacagag
tcccaattactaccagatgtgggggctattgtaacctgtaaggtctctagcatcaattcg
cgctttgccaaagtgcacatcctatatgtagggtccacaccacttaagaactcttttcga
ggaactatccgcaaggaagatgtccgagctactgaaaaagacaaggttgagatttataaa
agtttccgcccaggtgacattgtgttggccaaagtgatctccctgggtgatgcacagtcc
aactacctcctgaccactgctgagaacgaactcggggtggtggtcgcccacagtgaatca
ggtgtccagatggttcccattagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtggcccgagtacaacctgaattcttgcagacttaa
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