Neomonachus schauinslandi (Hawaiian monk seal): 110589622
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Entry
110589622 CDS
T08474
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04110
Cell cycle
nsu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110589622 (SMC3)
04114 Oocyte meiosis
110589622 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsu03036
]
110589622 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nsu00535
]
110589622 (SMC3)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110589622 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
110589622 (SMC3)
Proteoglycans [BR:
nsu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
110589622 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
110589622
NCBI-ProteinID:
XP_021555824
UniProt:
A0A2Y9I0Z1
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Position
6:135205442..135243796
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaaacaggttattatccagggttttcggagttacagagatcaaacaattgta
gatcccttcagctcaaaacataatgttatcgtgggaagaaatggatctggaaaaagtaac
tttttttatgcaattcagtttgttcttagtgatgagttcagtcatcttcgtccggaacag
cgattggctttgttgcatgagggtactggtcctcgtgtcatttctgcttttgtggagatt
atttttgataattcagacaaccggttgccaattgataaagaagaagtttcacttagaaga
gttattggtgccaaaaaggatcagtatttcctagacaagaaaatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctggtttttctcgaagcaatccttattatattgtgaaa
caaggaaagatcaaccagatggccacagcaccagattctcagagactaaaactattaaga
gaagtagctggtactagagtatatgatgaacgaaaagaagaaagcatatctttaatgaaa
gaaacagagggcaaacgggaaaaaatcaatgagttgttaaaatacattgaagagagatta
cataccttagaggaagaaaaggaagaactagctcagtatcaaaagtgggataaaatgaga
cgagccctggaatataccatttacaaccaggaacttaacgagactcgtgctaaacttgat
gagctttctgctaagcgagagactagtggagaaaaatccagacaattaagagatgcccag
caggatgcaagagataagatggaggatattgagcgccaagttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaggagcagctcagcgctgaaagacaagagcaaattaag
cagaggactaagttagagcttaaagccaaggatttacaagatgaattggcaggcaatagt
gaacaaaggaaacgcttattaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacagtgtgaaagaaaaagaagagcga
ggaattgctagattggcccaagctacccaggaaagaacagatctttatgcaaagcagggt
cgaggaagccagtttacatcaaaggaagaaagggataaatggattaaaaaggaactcaag
tctttagatcaggctattaatgacaagaaaagacagattgctgctatccataaggatttg
gaggacactgaggcaaataaagagaaaaacctggagcagtataacaaactggatcaggat
cttaatgaagtcaaagctcgagtagaagaactggacagaaaatactacgaagtaaaaaat
aagaaagatgaattacaaagtgaaagaaattacttgtggagagaggagaatgcagaacag
caagcactcgctgctaaaagagaagatcttgaaaagaaacagcaacttcttagagcagca
acaggaaaggctattttaaatggaatagacagcataaacaaagtactggaccactttcgt
aggaaaggaataaaccagcatgttcaaaatggctatcacggcatcgtgatgaataacttc
gaatgtgagcctgctttctacacatgcgtggaagtcactgctggcaacaggttattttat
catattgttgattcagatgaagtcagcacaaagattttgatggagtttaataaaatgaat
cttcctggagaggtcacttttcttcctcttaacaagttagatgtcagggatactgcctat
cctgaaaccaatgatgcgattcctatgataagtaaattgaggtacaatcccagatttgac
aaagctttcaaacatgtgtttgggaaaacacttatttgtcgtagcatggaagtttcaacc
cagctagcccgtgcttttactatggactgcattaccctggaaggtgaccaagttagccat
cggggtgctctaaccggaggttattatgacacaaggaagtctagacttgaattgcaaaaa
gatgttagaaaagcagaagaagaactaggtgagcttgaagcaaagctcaatgaaaacctg
cgcagaaatattgaaaggattaataatgaaattgatcagttgatgaaccaaatgcagcag
atagagacccagcaaaggaaatttaaagcatctcgagatagcatattatcagaaatgaag
atgttaaaagagaagaggcagcagtcagagaaaacctttatgccaaagcaacgtagctta
caaagtttggaggcaagtttgcatgctatggagtccaccagagaatcgttgaaagcagaa
ctgggaactgatttgctttcacaacttagtctggaagatcagaagagagtagatgcactg
aatgatgaaattcgtcaacttcagcaggaaaacagacagttgctgaatgaaagaattaaa
ttagaaggtatcattactcgagtagagacatacctaaatgagaatttgaggaaacgcttg
gaccaagtagaacaggaacttaatgaactgagagagacagaagggggtactgttctcact
gctacaacctcagaacttgaagcaatcaataaaagagtaaaagatactatggcacgatca
gaagatttggacaattccattgataaaacagaagctggaattaaggagcttcagaagagt
atggaacgctggaaaaatatggaaaaagaacacatggatgctataaatcatgatactaaa
gaactagaaaagatgacaaatcgacaaggcatgctactgaagaagaaagaagagtgtatg
aagaaaattcgagaacttggatcacttccccaggaagcatttgaaaagtaccagacactg
agcctcaaacagttgtttcgaaaacttgaacagtgcaacacagaattgaagaagtacagc
catgttaacaaaaaagctttagatcagtttgtaaatttctctgagcagaaagaaaagtta
ataaaacgacaagaagagttggatagggggtacaaatcaatcatggaactgatgaatgta
cttgaacttcgaaaatatgaagctattcagttaactttcaagcaggtatccaagaacttc
agtgaagtattccagaagttggtacctggtggcaaagctactttggtgatgaagaaagga
gatgtggagggcagtcagtctcaggatgaaggagaaggaagtggtgaaagtgagaggggt
tctgggtcacaaagcagtgtcccatcagttgaccagttcactggagttggaattagggtg
tcatttacaggaaaacagggtgaaatgagagaaatgcaacagctttctggtggacagaaa
tccttggtagctcttgctctgatttttgctattcagaaatgtgacccagctcctttttac
ctgtttgatgaaattgaccaggctctggatgcccagcacagaaaggctgtgtcagatatg
attatggaacttgctgtacatgcacaatttattacaactacttttaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaagtttagaaataaggttagtcatattgacgtg
atcacagcagagatggccaaagactttgtagaagatgatactactcatggttaa
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