Neomonachus schauinslandi (Hawaiian monk seal): 110589866
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Entry
110589866 CDS
T08474
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu05014
Amyotrophic lateral sclerosis
nsu05017
Spinocerebellar ataxia
nsu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110589866 (ATXN2L)
05017 Spinocerebellar ataxia
110589866 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
110589866 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110589866 (ATXN2L)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110589866 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
110589866
NCBI-ProteinID:
XP_044771586
UniProt:
A0A8M1MCK9
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All DBs
Position
5:complement(159007867..159020196)
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AA seq
1105 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPAGPPAAASPCLG
PAAAAGSGLRRGAEGILAPQPPPPQQHQERPGATAIGSARGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDSSSPGPGSETRGINGGPSRMSPKAQRPVRGGA
KTLSSPSSRPSGEASAPPPPAAFPFLPVGRMYPPRSPKSAAPAPISASCPDAPMGSAVPT
SSASIPVTSSVVDPGVGSISPASPKISLAPTDVKELPAKEPGRTLESQELSRIAGKVPGL
QNEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLTSEPVG
SPVSSKTESVSDKEDKPPLPPAGGTEGPEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQ
VKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISY
IPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAA
AGPPLVAATPYSSYIPYTPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQA
IVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSP
VQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQ
LPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPA
LSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPS
SLSCDPAAPLPTASPALSDPDCLLT
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgccggcctcccgggggcactagccctcccaacggcggcctcccgggg
cccctggcctccacctcggctcccgcagggcctcccgcggccgcttctccctgcctgggg
cctgcagccgccgccgggagcgggctccgccggggagccgagggcatcttggcgccgcag
ccgccgccgccgcagcaacaccaggagaggccaggggcgacggctatcggcagcgccagg
ggacaaagcacaggaaagggacccccacagtcaccggtgttcgaaggtgtctacaacaat
tccagaatgctgcattttcttacagctgttgtgggctccacttgtgatgtaaaggtgaag
aatggtaccacctatgaaggtatcttcaagactctgagctcaaagtttgaactagcagta
gatgctgtacaccggaaagcatctgagccagcaggtggccctcgtcgggaagacattgtg
gacaccatggtgtttaagccaagcgatgtcatgcttgtccacttccgaaatgttgacttc
aattatgctactaaagacaaattcactgattcagccattgccatgaactcaaaggtgaat
ggggagcacaaagagaaggtgcttcagcgctgggaagggggcgacagcaacagcgatgac
tatgacctcgagtctgacatgtccaatggatgggaccccaacgaaatgttcaagttcaac
gaggagaactatggtgtaaagaccacctatgacagcagtctttcttcttacacggtgccc
ttggagaaggacaactcagaagagtttcgtcagcgggagctgcgtgcagcccaattagct
cgagagattgaatcgagcccccagtaccgcctgcggattgccatggagaacgatgatggg
cgcaccgaggaggagaagcacagtgcggtccagcggcagggttcaggacgggagagcccc
agcttggcatctagggagggaaagtatatccctctaccccagcgagttcgggaaggtccc
cggggaggagttcgatgcagtagttcccggggtggccggcctggccttagctctttgcca
cctcgtggccctcaccaccttgacagtagcagccccggcccaggttctgagacacgtggt
atcaatggaggcccttcccgcatgtcccctaaggcacaacggcctgtgagaggtggtgcc
aagactctgtcctcacccagcagtaggccttctggagaagcttctgctccgccccctcct
gcagctttcccttttcttccagtgggccggatgtaccccccgcgctctcccaagtcggct
gcccctgccccaatctcagcttcctgtcctgatgcccccatgggctcggcagtaccgacc
tcttcggcttctatccctgtgacatcatcggttgtggatcctggagtaggctccatttcc
ccagcttctccaaagatctcattggcccccacagatgtaaaagaacttccagccaaggaa
cctgggagaactctggagtcccaggagctgtcccggatagctgggaaagtccctggcctt
cagaatgaacagaaacgctttcaactggaagaactgagaaagtttggggcccagtttaag
ctgcagcccagtagctcccctgagaccagcctggatccttttcctccccggatcttaaag
gaggaggccaaagggaaagagaaggaggttgatggtttattaacatcagagccagtgggg
tccccagtctcctcgaagacggagtccgtatcggataaggaggacaagccgcccctgccg
ccggcaggaggcacagaggggcccgagcagcccccgccaccttgcccaagccagactggc
agccccccggtaggcctcatcaagggagacgacaaggatgagggcccggtcgctgaacaa
gtgaagaagtcaacactgaaccccaacgccaaggagttcaatcccacaaagcctctgctg
tctgtgaataaatctaccagtaccccgacttctccggggccccggactcattcaactccc
tccatcccggtgctgacagcaggccagagtgggctctacagcccccagtacatttcctac
atacctcagatccacatgggaccagctgttcaggcacctcagatgtatccataccctgta
tccaattctgtgcctggacagcagggcaagtaccggggagcaaaaggctccctgcccccc
cagcgctcggaccaacaccagccagcctcagcccctccgatgatgcaggccgccgccgct
gctggcccacctctggtggctgccacgccgtactcttcctacatcccttacaccccacag
cagttcccgggccagcccgccatgatgcagcccatggcccactacccctcgcagccagtg
tttgcccccatgcttcagagcaacccacgcatgctgacgtcggggagccatccccaggcc
attgtgtcgtcctccacccctcagtacccttctgcagagcagcccaccccccaagccctc
tatgccactgttcaccagtcctatccacaccatgccacgcagctccatgcccaccagccg
cagccggccaccacacctactgggagccagccgcagtcccagcatgcggcccccagtccc
gtccagcaccaggcggggcaggccccacacctgggcagtggacagccacagcagaatctg
taccacccaggggccctgacaggcacgccgccttctctgccaccgggaccttctgcccag
tcccctcagagcagcttcccccaaccagccgctgtatatgccatccatgcccatcagcag
ctgccccacggcttcaccaacatggcccatgttacccaggcccatgtccaaactggaatc
acagcagccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcac
ccaccccagagccatgggggccccccccaaggcgcggtgccccagagtggggtgcctgca
ctctcagcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcct
ggccaggcgcctggatttccaggaggagccgatgacaggattctatgtagggtgggcaga
agccacagtcgccgccgccaggggcttgctcctggctctgtcctttgcttccctccgtcc
tcgctcagttgtgatccagcagcccccctccccactgcctccccagctctcagtgacccc
gactgtctcctgacttag
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