Neomonachus schauinslandi (Hawaiian monk seal): 110590286
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Entry
110590286 CDS
T08474
Symbol
LRFN1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nsu04515
]
110590286 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
nsu04990
]
110590286 (LRFN1)
Cell adhesion molecules [BR:
nsu04515
]
Immunoglobulin superfamily
SALM family
110590286 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
nsu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
110590286 (LRFN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_9
LRR_14
Ig_DSCAM-DSCAML_C
CbiM
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
110590286
NCBI-ProteinID:
XP_021556730
UniProt:
A0A2Y9I583
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Position
16:13234942..13241702
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AA seq
770 aa
AA seq
DB search
MAPGPFSSGLLSPPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVP
PAIDRRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHL
DSNRLAEVRGDQLRGLGNLRHLILGNNQIRRVESAAFDAFLATVEDLDLSYNNLEALPWE
AVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGSGPK
PPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPL
ITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTIT
TLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGAN
ESATERRLVAAELTSNSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLV
NDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAI
GGVIVASVLVFIVLLMIRYKVYGDGDGRRVKGTSRSPPRVSHVCSQTNGAGAPQAPPPPA
QDRYEALREVASPAAAAVAVEAKGPAAETASAEPENVLGRSLGGSATSLCLLPSEETSGE
ESRAAAGPRRSRSGALGPPASAPPTLALVPGGAPARPRPQQRYSFDGDYGALFQSHSYPR
RARRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggctccgggccccttctcctcggggctcctctcgccgccgcctgctgccctgcccttt
ttgctgctgctctgggccggggcgtctcgtggtcagccctgccccggccgctgcatctgc
cagaacgtggcgcccacgctgaccatgctgtgcgccaagaccggcctgctcttcgtgccg
ccggccatcgaccggcgcgtggtggagctgcggctcactgacaacttcatcgcggctgtc
cgccgcagagacttcgccaacatgaccagcctggttcacctcaccctgtcccgtaacacc
atcggccaggtggccgccggcgccttcgccgacctccgcgccctccgcgccctgcacctc
gacagcaaccgcctggccgaggtgcgtggcgaccagctccgcggcttgggcaacctccgc
cacctgatcctcggcaacaaccagatccgccgggtggagtccgccgccttcgatgccttc
ctggccaccgtggaggacctggatctgtcctacaacaacctcgaggccctgccgtgggag
gctgtgggccagatggtgaacctgaacaccctcacgctggaccacaacctcatcgaccac
atcgccgaagggaccttcgtgcagctgcacaaactggttcgcctggacatgacctccaac
cgcctgcacaaactgccccctgatgggctcttcctgaggtcccagggctcggggccgaag
ccgcctacgccgctcacggtcagcttcggcggcaaccccctgcactgcaactgcgagctg
ctctggctgaggcggctgacgcgggaggacgacctggagacgtgcgccacccccgagcac
ctcaccgaccgctacttctggtccatccccgaggaggagttcctgtgtgagcccccgctg
atcacgcgccaggcggggggccgggccctggtggtggagggccaggcggtcagcctgcgg
tgccgcgccgtgggggaccccgagcccgtggtgcactgggtggcgcccgatgggcggttg
ctggggaactcgagccggacccgggtgcggggggatgggacgctggatgtgaccatcacc
accttacgggacagcggcaccttcacctgcatcgcctccaacgccgccggggaagccact
gcgcccgtggaggtgtgcgtggtgcccctgcctctgatggcgcccccgccagccgccccg
ccgcctctcacggagcccggctcctctgacatcgccacgcccggccgccctggtgccaac
gaatcggccaccgagcgccggctcgtggcggccgagctcacctcgaactcggtgctcatc
cgctggcccgcccagagacctgtgcccggcatccgcatgtaccaggtccagtacaacagc
tccgcggatgactcccttgtctacaggatgatcccatccaccagccagaccttcctggtg
aatgatctggcagcaggccgcgcctacgacctgtgcgtgctggctgtctacgacgacggg
gccacggcactgccggccacgcgagtggtgggctgcgtgcagttcaccaccgctggggat
cccgcgccctgccgcccactgagggcccatttcttgggtggcaccatgatcatcgccatc
gggggcgtcatcgtcgcttcggtcctcgttttcatcgttctgctcatgatccgctataag
gtctacggcgacggggacggtcgccgcgtcaagggtacctccaggtcgccgccgcgggtc
agccacgtgtgctcgcagaccaacggcgcaggcgccccgcaggcccctcccccgccggcg
caagaccgttacgaggcgctgcgcgaggtggcgtcccccgctgctgccgccgtggcggtc
gaggccaagggccccgcggccgagacggcttccgcggagccggagaacgtccttggacgc
tccctgggcggctcggccacctcgctgtgcctgctgccgtctgaggaaacctctggggag
gagtctcgggccgcggcgggccctcggagaagccgttccggggccctggggccgccagct
tcggcgcctcccactctagctctggttcctgggggcgccccggcccggccgaggccgcag
cagcgctattcgttcgacggggactacggggcgctcttccagagccacagttacccgcgc
cgcgcccggcggacaaagcgccaccggtccacgccgcacctggacggggccggagggggc
gcggccggggaggacggagacctggggctgggctccgccagggcacgcctggcctttacc
agcaccgagtggatgctggagagtaccgtgtga
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