Neomonachus schauinslandi (Hawaiian monk seal): 110590418
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Entry
110590418 CDS
T08474
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu01524
Platinum drug resistance
nsu03430
Mismatch repair
nsu05200
Pathways in cancer
nsu05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110590418 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110590418 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
110590418 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
110590418 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110590418 (MSH2)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110590418 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
110590418
NCBI-ProteinID:
XP_021556888
UniProt:
A0A2Y9HZ07
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Position
10:complement(71733969..71815539)
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AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVVKYIGPAGTKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSSLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAASALSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRA
LEKYEGKHQSLLLAVFVTPFIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGKITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECARQKALELEEFQNIGESEGYDDMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITMKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggaaacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccaggccatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccacgaggacgcgctgctggctgcccgagaagtgttcaagacc
cagggggtagtcaagtacatagggccggcaggaacaaagactctggagagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctagttcgacagtatagagtt
gaagtttataagaatagagctggaaataaggcctcaaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgtcgtgggtgttaaaatatctacagttgatggccaaagacag
gtcggagttgggtatgttgactccatacagcggaagctaggactttgtgagttccccgac
aatgatcagttctccagtttggaggctctgctgattcagattggaccaaaggaatgtgtc
ttaccaggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttttacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagagcaggtgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcagcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aagttggatattgcagcagtcagagcccttaaccttttccaggggtctgttgaagatact
actggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctggttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagactg
aatttggtggaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcagagacaagcagcaaac
ttacaagattgttaccgactctatcagggtataaatcaacttcctaatgttattcgggct
ctggaaaaatatgaaggaaaacaccagagtttattgttggcagtttttgtcactcctttt
attgatcttcgttctgatttctccaaatttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtgaaaccttcatttgatcccaatctgagtgaa
ttaagagaaattatggatgacttggaaaagaagatgcagtcaacattagtaagtgcagcg
agagatttaggtttggatcctggcaaacagattaaactggattccagtgcacagtttggt
tattactttcgcgtaacatgtaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acagtggacattcagaagaatggtgttaaatttaccaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaaccgagtatgaggaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacgctcaatgatgtgttagct
cagctagatgctgttgtcagctttgcacatgtgtcaaacggagcacctgttccatatgta
cgaccggtcattttggagaaaggacaagggaaaattacattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggccccaatatgggaggtaaatccacatatattcgc
caaactggggtgatcgttctcatggcccagattgggtgttttgtgccatgtgagtcagca
gaagtgtccattgtggactgcatcctggcccgtgtaggggctggcgacagtcagttgaaa
ggagtctccacattcatggctgaaatgctagaaactgcttctattctcaggtctgcaacc
aaagattctttaataattatagatgaattggggagaggaacctctacctatgatggattt
ggattagcgtgggctatatcagagtacatcgcaacaaagattggtgctttttgcatgttt
gcaacacattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcagagttttgggattcacgttgcagagcttgcaaatttccctaggcatgtc
atagagtgtgctagacagaaagctctggaactagaggagtttcagaatatcggagaatca
gaaggatatgatgacatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaggagtttttatccaaggtgaagcaagtgccttttactgaaatgtca
gaagaaaacatcacaatgaagctaaaacagctgaaagctgaggtaatagcaaagaataat
agttttgtaaatgaaatcatttcacgaatcaaagttactacatga
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