Neomonachus schauinslandi (Hawaiian monk seal): 110590839
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Entry
110590839 CDS
T08474
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03020
RNA polymerase
nsu03420
Nucleotide excision repair
nsu05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110590839 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
110590839 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110590839 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsu03021
]
110590839 (POLR2B)
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110590839 (POLR2B)
Enzymes [BR:
nsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110590839 (POLR2B)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110590839 (POLR2B)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110590839 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
110590839
NCBI-ProteinID:
XP_021557346
UniProt:
A0A2Y9I0L0
LinkDB
All DBs
Position
2:complement(158581573..158628944)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgaggacatgcaatatgatgaagatgatgatgaaatcaccccagac
ttgtggcaagaagcatgctggattgtaatcagttcctattttgatgagaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgccccacctatagacctacaagccgaagctcagcatgctagcggagaagttgaagaa
ccgccaagatacttgctgaagtttgaacaaatttacctctccaaacctacccattgggaa
agagatggtgctccttcaccaatgatgccaaatgaggccagattaagaaatctcacgtat
tctgctccactttatgttgatataacaaaaacagtcattaaggaaggtgaagaacaactt
caaactcagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttat
tgcctgttgaatggcttaacagatcgtgatctttgtgagttaaatgaatgccccttggat
cctggtggatatttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattctaaatatgcctacacgggagag
tgtagatcatgtctggagaattcttcgcgacccaccagtactatttgggttagcatgctg
gcaagagggggacagggtgcaaaaaagagtgctattggtcaacgcattgtggcaacccta
ccatatatcaagcaggaagttcccatcattattgtgttcagagcattaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gtgaaaccttctctcgatgaagcttttgtcatccaggaacagaatgttgcactaaatttc
attggctcaagaggggcaaagcctggtgtcactaaagagaaaagaattaaatatgcaaaa
gaagtcttacaaaaagaaatgctccctcatgttggtgtcagtgatttttgtgagaccaaa
aaagcttatttcttggggtacatggttcataggttgcttctagcagccttgggtcgaaga
gaattagatgacagggatcactatgggaacaaaagattggatcttgctgggccactgctt
gcattcttatttagaggtatgtttaagaatttgcttaaagaagtgcggatctatgcacag
aagtttattgatcgaggaaaggattttaacttggaattggcaattaaaacaaggattata
tctgatggcctaaaatattctttagctacgggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtgttaaaccgcctgacttttgcatctactctttct
cacctgcgtcgtttaaattcacctattggtagagatggcaagctagcaaaaccaagacag
ttgcataatacattgtggggaatggtgtgtcctgctgagactccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcggttggatctcaaccttctccc
attctggaatttttagaagagtggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatacataaagatcct
gaacaacttatgaacaccctaaggaaactgcggcgtcagatggacatcattgtgtctgaa
gtttctatgattagagatattcgagagagggagattcggatctatacagatgcaggccgt
atttgtaggccacttctgattgtagaaaaacaaaagctacttttgaagaagagacatatt
gatcaattgaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg
gtagtagaatacattgatactctggaagaagaaacagtgatgctcgcaatgactccagat
gatttacaggagaaagaagtagcttattgttccacatatacacactgcgagattcatccg
tcaatgattcttggtgtctgtgcatctattattccctttcctgatcataaccagtcccct
agaaacacatatcagtctgctatgggtaagcaggctatgggagtttatatcaccaacttc
catgttcgtatggatacattggcccatgttctgtattatcctcaaaaaccacttgtgact
acgcggtctatggaatatctacgatttagagagctgccagcaggtatcaactccatcgtg
gccattgcatcgtacacgggatataaccaagaagactctgttatcatgaatcgttcagct
gtagacagaggctttttcaggtctgtcttctatcgatcatataaagaacaggaatctaaa
aaaggatttgatcaagaagaagtttttgagaagccaactcgtgaaacatgccagggtatg
aggcatgccatttatgacaagctggacgatgatggtttgatagctcctggagtacgcgta
tcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaattg
gagggcactaatagacgctataccaagagagactgtagcacatttctgagaactagtgag
acgggcattgtggatcaggttatggtaactctcaaccaggaaggatataaattttgtaaa
ataagggtccgctctgttagaattccgcaaattggagacaaatttgctagtcgacatggt
caaaagggtacttgtggtattcagtacagacaagaggatatgcctttcacctgtgagggt
atcacccctgatatcatcataaatccccatgccattccgtctcgcatgactattggtcac
ttgattgaatgtcttcaagggaaggtatccgctaacaagggtgaaattggtgatgccact
ccatttaatgatgctgttaatgtgcagaagatttctaatctattatctgattatggctac
catcttagaggaaatgaggtcctatacaatgggttcactggtcgaaaaatcacatcacag
atttttattggccccacatattaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgccaggggacctattcagatccttaatagacagcccatggaaggtagatctcgt
gatggtggcctgcggtttggagaaatggaacgagattgtcagattgcccatggagcagcc
cagtttttaagggaaagattgtttgaggcatcagatccatatcaggttcatgtttgcaat
ctttgtggaataatggcgattgctaacacgaggacccatacgtatgaatgccggggctgc
cgcaataaaacccagatttctttggtgcgaatgccttacgcgtgcaaactgctgtttcag
gaacttatgtctatgagtattgcgcctcgaatgatgagtgtttaa
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integrated database retrieval system
