Neomonachus schauinslandi (Hawaiian monk seal): 110590885
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Entry
110590885 CDS
T08474
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03030
DNA replication
nsu03410
Base excision repair
nsu03420
Nucleotide excision repair
nsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110590885 (RFC1)
03410 Base excision repair
110590885 (RFC1)
03420 Nucleotide excision repair
110590885 (RFC1)
03430 Mismatch repair
110590885 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsu03032
]
110590885 (RFC1)
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110590885 (RFC1)
DNA replication proteins [BR:
nsu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110590885 (RFC1)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110590885 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
Rad17
AAA_14
RuvB_N
AAA_5
AAA_33
AAA_17
AAA_30
AAA_18
AAA_16
nSTAND3
AAA_7
Zeta_toxin
RNA_helicase
AAA_19
NTPase_1
NPHP3_N
TIP49
AAA_28
SKI
Motif
Other DBs
NCBI-GeneID:
110590885
NCBI-ProteinID:
XP_044768684
UniProt:
A0A8M1MC80
LinkDB
All DBs
Position
2:171230868..171302250
Genome browser
AA seq
1167 aa
AA seq
DB search
MKNHLVILKVKLLCETFISSRSNKDIRKFFGVIPSGKKPVSEAVKKNEKTKSAEETLKAK
KGIKEIKVNSSCKEDDSKQKQPSKKKRIIYDSDSESEETVQVKNAKKQPEKLPLSSKPGK
ILRQDPVTYISETDEEDDFMCKKAASKSKENGGSTNSYLGAANMKKIEENTKTKNKPLSP
IKLTPTSVLDYFGTGSVQRSDKKMVASKRKEPSQNADDSRLNDEVIAKQLQLDEDAELER
QLHEDEEFARTLAMLDEEPKTKKARKDPREREAFSSVQANLSKAEKHKSPHKVKTEQFSD
DRKNCSPKKQTKIGSQQHLKSSPHKIGETSPKTSSKVALLKKKGESSYKETEPVASKRKE
NAVELKGQTKTPKKPKSSPAKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKG
AENCLEGLTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKA
AALGTNIIDEDGLLNLIRTMPGKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTK
KESESKKSRLTPKKDSSIKSVKKETSMFWRCLDFEEQVAEETNGDSRARNLADDSSESKV
ENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNWHKGPSEDKKHAAKFGKFAGKDDG
SSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEVVAESLNNTSITG
FYSSGAAHSVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIR
SLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKVPPPAMNEIILGANQDIRQVLHNLSMW
CARSKALTYDQAKADSHRAKKDIRLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIA
PLFVQENYIHVKPVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPAQAIYA
SVLPGELMRGYMTQFPTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSH
VRDALVQPLTSQGVEGVQDVIALMDTYYLMKEDFENIMEISSWGGKSSPFSKLDPKVKAA
FTRTYNKEVHLTPYSLQAVKTPRHSTGPALDSEYNEELNEDDSQSDEKDQDSVETDAMIK
KKTKSSKPSKSEKDKESRKGKGKSSKK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatcatttggtaattttaaaagtgaaactcctatgtgaaaccttcatttcctcc
agaagcaataaagatattcggaaattctttggggttataccaagtggaaagaaacctgta
agtgaagcagtaaagaagaatgagaaaacaaagtccgctgaagaaaccttaaaagcaaag
aaaggaataaaggaaatcaaggtaaatagttcttgtaaagaagatgactctaaacagaag
caaccaagcaagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtg
caggtaaaaaatgccaaaaagcaaccagagaaattgccattgtcttctaaacctggtaaa
attctacgccaggatcctgttacatacatttcagaaacagatgaagaagatgacttcatg
tgtaagaaggcagcctctaaatcaaaagagaatggaggatctacaaatagttatcttgga
gcagcaaacatgaaaaagattgaagaaaacactaagaccaagaataaacctttatcacca
ataaaacttacccccacgtcagtgcttgattattttggaactggaagtgtccaaagatca
gataagaagatggtagcaagcaaaagaaaagagccttcacaaaatgcagatgattccaga
ttaaatgatgaagtcatcgccaagcagttgcaacttgatgaggatgcagagctggagaga
caactacatgaagatgaagagtttgccagaacgttagccatgttggatgaagaacccaag
accaaaaaggctcggaaggacccaagagagagagaagcgttttcatctgtccaagccaat
ttaagtaaagcagaaaaacataaatctcctcataaagtaaaaacagaacaattttcagat
gacagaaagaactgcagtcccaagaagcaaactaaaataggatctcagcaacatttgaag
tcatcccctcacaaaataggagaaacttctccaaaaaccagttccaaggtagcccttttg
aaaaaaaagggagagagttcttataaagaaacagagcctgtggcttcaaaaagaaaagaa
aatgctgttgaattaaaaggacagacaaaaacgcctaagaaacccaaaagttctccagct
aaaaaagagtctgtaagtcctgaagattctgagaagagacgcactaattatcaagcttat
cgaagctacttaaatagagaaggccccaaagctctgggctccaaagaaataccaaaggga
gctgaaaattgcttggagggccttacatttgtaatcacaggagtgctggagtccattgaa
cgagatgaggccaagtctctaattgagcgttacgggggcaaagtaacaggaaatgtcagc
aagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgataaggca
gcagccttggggacaaatattattgatgaagatggcctattgaatctgattcgaactatg
ccaggcaagaagtctaagtatgaaatagcagttgaagctgagatgaagaaagaaaagtcc
aaattggaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaattagcccaactaag
aaagagtcagaatctaaaaaaagcagactgactcccaaaaaggacagctccataaagtca
gtaaaaaaggaaaccagtatgttttggagatgcctggacttcgaggagcaggtggctgag
gagacaaatggtgacagccgggctaggaatttggctgatgacagcagtgaaagcaaagtg
gaaaatttgctctgggtggataaatataagccaacctcactcaagaccataattggacag
caaggtgaccagagctgtgccaacaaactcctccgctggctccagaactggcacaagggt
ccatccgaagataagaaacacgcagcgaagtttggtaagtttgctggcaaagatgatggc
tctagttttaaagcagcgctgctctcaggccctccaggtgttggcaagacaaccacagcc
tctctggtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgacactcgg
agtaagaacagtttgaaggaggttgttgctgaatcactgaataataccagcatcacaggc
ttttattcaagcggagcagcccattcagtaagcacgaaacatgctctcatcatggatgaa
gtagatggcatggcaggcaatgaggacaggggaggaattcaggaattaattggtctgata
aaacatacaaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagattcgt
tctttggttcattattgttttgatcttcgttttcaaagacctcgagttgaacagattaag
ggtgctatgatgtctattgcatttaaagagggtttgaaggtcccccctccagctatgaat
gaaataattttgggagccaatcaagatatcagacaggttttacacaatctgagtatgtgg
tgtgcacgaagtaaggcactaacctatgaccaggccaaggctgattctcatagagccaag
aaggatatcagactgggcccatttgatgttgcccggaaggtgtttgcagctggagaggag
actgctcatatgtcacttgtggacaagtccgatctgttctttcatgattactcaatagca
cccctctttgtccaggagaactacatacacgtgaagcctgtagctgcagggggtgacatg
aaaaagcacctgatgcttttaagcagagcagcagatagcatatgcgatggtgacctagtg
gaccgtcagatccggagtaagcaaaactggagtcttctgcccgcacaggccatttatgcc
agtgttcttcctggagagttaatgagggggtacatgactcagtttcctaccttcccaagc
tggttggggaagcactcatctaccggcaaacatgatcgtattgtacaggacctagcactg
cacatgagtcttagaacttattccagcaaaaggactgtaaacatggattatctgtcccat
gtaagggatgcacttgtacagcccttgacctcacaaggggtagaaggagtacaggacgtt
attgctcttatggacacctactacttgatgaaagaagactttgagaatatcatggaaatt
agcagctggggaggcaaatctagtcccttctccaagctggaccccaaggtgaaagcagcc
ttcacaagaacttacaataaggaagtccaccttactccatattcacttcaggcagtaaag
acacccagacacagcacaggcccagcactggattctgaatacaatgaagagttaaatgaa
gatgactctcaatctgatgagaaagaccaagactctgtggaaactgatgcaatgatcaag
aaaaagacaaaatcttcaaagccttcaaaatcagaaaaagataaggagtccagaaaagga
aaaggaaaaagttcaaagaaatga
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