Neomonachus schauinslandi (Hawaiian monk seal): 110590896
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Entry
110590896 CDS
T08474
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03440
Homologous recombination
nsu03450
Non-homologous end-joining
nsu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110590896 (RAD50)
03450 Non-homologous end-joining
110590896 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
110590896 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsu03032
]
110590896 (RAD50)
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110590896 (RAD50)
DNA replication proteins [BR:
nsu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
110590896 (RAD50)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
110590896 (RAD50)
BRCA1-C complex
110590896 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
110590896 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
ABC_tran
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
110590896
NCBI-ProteinID:
XP_021557406
UniProt:
A0A2Y9I0S2
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All DBs
Position
7:24159469..24243552
Genome browser
AA seq
1311 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSVSSKCAEIDREMISSLGVSRSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFNERHIKNFHKLVRERQEREAEIASQLMNDFTE
KETLKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEALKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPVRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKMELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTLEKFQQEKEELINKKNKSNKIAQDKMNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKENELNKVIAQLSECERHKENINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDSIKRNHSLAIGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLSYVH
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattttgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttatagctgtacagaggtctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtgtcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaggtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgaaggaaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacataaaagccttggaaacactgcggcaggtacgacagacacagggt
cagaaagtaaaagaatgtcaaacagaactaaaatatttgaagcaaaataaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagcccagttaacatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagacttgacaatgaaattaaagccttggatagccggaagaag
caaatggagaaagataatagtgaactggaacagaaaatggagaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccaaagaacagtaagggagaaagaaagg
aggctggtagactgtcagcgtgaactggaaaagttaaataaagaatcaaggcttctcaat
caggaaaaatcagaactgcttgttgagcagggtcgtctgcagctacaagcggatcgccat
caagaacatatccgagcgagagattcattaattcagtctttggcaacacagctagaatta
gatggctttgagcgtggaccattcaatgaaagacatattaaaaattttcacaaacttgtg
agagagaggcaagaaagggaagcagaaattgccagccagctgatgaatgactttacagaa
aaagagactctgaaacaaaaacagatagatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaactaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcggacaggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagctcta
aaaacagaagtaataagtcttcaaaatgagaaagcagacctagacaggaccctgcgtaag
ttggaccaggagatggaacagttaaaccatcatacaacaacacgcacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctcgacacagt
gatgaattaacttcattgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatataaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacaggcttaaagaagaaattgaaaaatcctcaaaacagcgagccatgctggct
ggagccacagcagtatactcccaattcattactcagctaacagatgaaaaccaatcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactgaagtcaacagaatctgaactaaag
aaaaaagaaaaacggcgtgacgaaatgctgggacttgtccccgtgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcttaaagaatgacatagaggaacaggaaacactcttgggcacaataatgcct
gaagaagaaagtgctaaagtctgcctgacggatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaaactgcaaggactagat
ttggatagaactgttcaacaagtaaaccaggaaaaacaagaaaagcaacacaaattagat
acagtttccagtaagatggaattgaatcgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatctactaat
ttacaacgtcgtcagcagctagaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgctaaagagcagttaagccctttggaaacaacactggag
aagttccagcaggaaaaagaagaattaatcaacaaaaaaaataaaagcaacaaaatagcc
caggataaaatgaatgatatcaaagaaaaggttaaaaatattcatggttatatgaaagac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaatgaactt
aataaagtaatagctcaactaagtgaatgcgagagacacaaagaaaatataaataaagaa
atgggaatcatgagacaagatattgatacacagaagatacaagagagatggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaacgaaaacag
catttgaaggaaatgggtcaaatgcaggttttacaaatgaagaatgaacatcagaagttg
gaagaaaaaatagacagtataaaaagaaatcacagtttggcaatagggcgacagaagggc
tatgaggaagaaattattcattttaagagagaacttcgagaacctcaatttcgggatgcg
gaggaaaagtacagggaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgatcaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtccgatgccgatgaaaatgtatcagcctctgataaaaggcgg
aactataactaccgcgtggtgatgctaaagggagacacagccttggatatgcgaggacga
tgcagtgctggacaaaaggtattagcctcactcatcattcgcctggccttggctgaaacg
ttctgcttgaactgtggcatcctggccttggatgagccaacaacaaatctcgaccgagaa
aacattgagtctcttgcacatgctcttgttgagataatcaagagtcgctcacagcagcgt
aacttccagcttctggtcatcactcacgatgaagattttgtggagctcttaggccgttct
gaatatgtggagaaattctacaggattaagaagaacatcgatcagtgctcagagattgtg
aaatgtagtgttagctccctgtcttatgttcattaa
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