Neomonachus schauinslandi (Hawaiian monk seal): 110591330
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Entry
110591330 CDS
T08474
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03013
Nucleocytoplasmic transport
nsu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110591330 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110591330 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110591330 (NUP54)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110591330 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
110591330
NCBI-ProteinID:
XP_021557918
UniProt:
A0A2Y9I214
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All DBs
Position
2:142920769..142952111
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AA seq
507 aa
AA seq
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MAFNFGAPSGTSGTAAATAAPAGGFGGFGTSTTAGSAFSFSAPANTGTTGLFGGTQNKGF
GFGTGFGTTTGSSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSSQLINT
ASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSC
MPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEV
VIYVVERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQNP
PAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISE
LQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCE
LNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISI
IKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaactttggggctccctcgggcacctctggcaccgctgcagccaccgcggcc
cccgcgggtgggtttggaggatttgggacatctacaacagcaggttctgcattcagcttt
tctgctccagctaacacaggcactactggactcttcggtggtactcagaacaaaggtttt
ggctttggtactggttttggcacaacaactggaagtagtactggtttaggtactggtttg
ggaactggactgggatttggaggatttaatacacagcagcagcaacagcaaactacatta
ggtggtctcttcagtcagcccacacaagctcctacacagtccagccaactgataaatact
gcaagtgctctttctgctccaacgctgttgggagatgagagggacgctattttagcaaaa
tggaatcagctgcaggccttttggggcacaggaaaaggatatttcaacaataacattcca
ccagtggaattcacacaagaaaatcccttttgccgatttaaggcagtaggatatagttgt
atgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaagaaaca
gatattcgaagccaacaacagcagttggtagaatcattacataaagttttgggaggaaac
cagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagacagaagtt
gtcatttatgttgttgagcgttctccaaatggtacttcaagaagagttccagctacaaca
ctgtatgcccattttgaacaaactaatataaaaacacagttgcagcaacttggtgtaacc
ctttctatgactagaactgaactttctcctgcacaaatcaaacaacttttacagaatcct
cctgctggtgttgatcctattatctgggaacaagccaaggtggataaccctgattctgaa
aagttaattcctgtacccatggtgggtttcaaagaacttcttcgaagactgaaggttcaa
gatcagatgactaagcagcatcagaccagattagatatcatatctgaagatattagtgaa
ttacagaagaatcaaactacaactatggccaaaattgcacaatataagaggaaactcatg
gacctttcccatagaaccttacaggtcctaatcaaacaggaaattcagaggaagagtggg
tatgccatccaagctgatgaagagcaactgcgagttcagctagatacaattcagtgtgaa
ctgaatgcacctacccagtttaagggccgactaaatgaactgatgtcccaaatcaggatg
cagaatcatttcggagcagtcaaatctgaggaaagatattacatcgatgcagatctgtta
cgagaaatcaagcagcatctgaaacaacaacaggaaggccttagccacttgattagcatc
ataaaagatgacctagaagatataaagttggtagaacatggattgaatgaaaccatccac
atcagaggtggtgttttcagttga
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