Neomonachus schauinslandi (Hawaiian monk seal): 110591661
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Entry
110591661 CDS
T08474
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsu03021
]
110591661 (TAF1C)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
110591661 (TAF1C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
110591661
NCBI-ProteinID:
XP_021558264
UniProt:
A0A2Y9I7N9
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Position
16:complement(54988134..54999561)
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AA seq
859 aa
AA seq
DB search
MQAAFRRQKRMDFPSSLRPTLFMTGPLGLSNVPDMSFMCSWRDALTLPESLPENSKNEAP
HLATGLLWEPETPGPLPLLPPGPDPWDPGVTAQDLLFRGAFPFRRKPRAVLDVTEQLSRF
LWDHGDIAFAPLGKLMLENFKLEGARSRSKKKTVVSVKSLLQDLGGHQPWGCPWAFLSYR
QRRFSIVGGPVLGKSVASLLGELLHEELAMRWEQLLLDDAFTGGALAWVPGGTPQVGQLV
YPAGGALDTLCFQEVSLPPGGDPQALGDPGHIQLRGPVRQVVTRTVQGESLLAVRSDYHC
ALWKVSKQGRAAPLQVLQVGKGATGISLSPHLPGELAVCSRSGAVCLWTPQDGLQQVYKD
PETLVFCDPSPWRWADFTAHPRVLTVGDRTGVKIIDTQGPPGCGLLLFRGGAEAACRKGE
RVLLSQYLGECGAEPRLPTLQLICTQFSLYLVDERLPLVPMLKWDHDLPSAPLWAQLLPP
PCPGYPQPLLLGGQGGHLQLLHLAGEGASAPRLAGPPQSLPSSSDSLSAFPLLEPKSQWR
LQERLKAPTIGLAATIPSSASKPVLSLFQLSAAGDVFHQHLHLQADPGPHSRAPTASWTP
QATACCSRWLKALLDVPPTPPVWAAPTFSHRRLLGCMEQRKVEQKGPEGLRAAMAAGRLL
RQKDLGSLPSAGPPPAPEPGPEDELSARLEAAWEGRMAAWWERQQGRSSGPSRQPKRRKR
RTPLSSTFSSLSGRLDLSDATSPPHSPDRASPEARPRPPVTPPSQESTQELWARGVPSER
QQTLRDYMARLPLQEDTPRGVCSPLSGTSSSRATPSRPQTLQDGTAELPPGRNTRRGAAV
SSSQTSRQQVLRKKPRMGF
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcagctttcagaagacagaaaaggatggacttccccagctccctccgacccacg
ctgttcatgactggcccccttggtctgagtaatgtccctgacatgtccttcatgtgtagc
tggagagacgccctgaccctgccagagtcactgcccgagaactctaagaatgaggcgcca
cacttggccacaggcctactctgggagccagagacccccggaccccttcctttgctgcct
cctggtcctgatccctgggaccctggggtgactgcccaggacctgcttttccggggagct
ttcccgttccgaaggaagccccgagctgtgctggacgttaccgagcagctcagccgcttc
ctgtgggaccatggggacatagcctttgcacccctggggaagctgatgctggagaatttc
aaactggagggagcacggagccgttctaagaagaagacagtggtcagtgtgaagagtcta
ctccaggacctcggtggacaccagccctggggctgcccctgggctttcctcagctaccga
cagcgccggttctccatcgtcgggggccccgtcctgggcaagtcagtggccagcctcctg
ggagagctgctgcacgaggagctggctatgcggtgggagcaactgctcctggacgacgca
ttcaccgggggcgctttggcctgggtgcctggggggacaccgcaggtgggacagttggtc
taccctgcgggaggtgctctagacacgctctgtttccaagaggtcagtctgcccccaggc
ggtgaccctcaggctctcggggaccctggccacatccagctccgaggacctgtccggcag
gtggtgacccgcactgtgcaaggggaatccctgctggctgtccgctctgactaccactgt
gccctgtggaaggtcagcaagcaggggcgggccgcccctctccaggtgctgcaggtcggg
aagggggccacagggatcagcctcagccctcacctgcctggggagctggctgtctgcagc
cgttccggagctgtctgtctgtggaccccccaggatgggctgcagcaagtctacaaggac
cctgagacccttgtgttctgtgacccctctccctggcgttgggcagacttcaccgctcat
ccccgggtgctgactgtgggggaccgcactggagtgaaaattattgacactcagggccca
cccggctgtggtctgctgcttttccgtggtggggcagaagcagcatgccggaaaggggag
cgggtcctgctgagccagtacctgggggagtgcggcgccgagcctcgactgcccacactc
cagctcatctgtacccagttctcgctctacctggtggacgagcgcctccccttggtgccc
atgctgaagtgggaccacgacctcccctcggctcccctgtgggcccagctgctgcccccg
ccctgccccggctacccccagccgctgctcctggggggccagggcgggcacctgcagctg
ctgcacctcgcaggagagggggcctctgcaccccggctggcggggcccccccagtctctc
ccttccagcagcgactccctctccgcgttccccctgctggagcccaagagtcagtggcgt
ctgcaggagcgtctgaaagcgccaactatagggctggctgctaccatcccatcgtcggct
tccaagccagtcctatcgctcttccagctctcggcggctggggatgtcttccaccagcac
ctccacctccaggcagaccctgggcctcactcccgtgcccccacagcttcctggactccc
caggccactgcctgctgcagccggtggctgaaggcccttctggacgtgcccccgaccccg
cctgtgtgggcagcacccaccttctcccaccgccgtctgctaggctgcatggaacagagg
aaggtggagcaaaaggggccggagggtctccgagcggccatggctgcagggcggctgctg
cggcagaaggacctgggctcgctcccctccgcggggccgccccccgcccccgagccaggc
cctgaggatgagctcagtgcacgtttggaggcagcctgggaaggccggatggctgcctgg
tgggagaggcaacagggcaggagctcggggcccagcagacagcccaagcggcgcaagcgc
cggactccgctgtccagtactttctcctcgctcagcggccgcctggacctctcagacgcc
accagcccccctcacagcccagaccgggcgtcccctgaggccaggcctcggccaccagtg
accccgccctcccaggagtcgactcaggagctgtgggctcggggggtcccctcggagcgg
cagcagactcttcgcgactacatggccaggctgccgctccaagaggacaccccacgaggt
gtctgctcccccctctccgggacctccagcagccgggccacgccctccaggccccagacc
ctgcaggatggcacggccgagctgccgccaggaaggaacacccggagaggtgccgctgtg
tcctcctcccagacctccaggcagcaggtgctgcggaagaagccccgcatgggcttctga
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