Neomonachus schauinslandi (Hawaiian monk seal): 110591790
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Entry
110591790 CDS
T08474
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110591790 (PMS1)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110591790 (PMS1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HMG_box_5
MRP-L46
Motif
Other DBs
NCBI-GeneID:
110591790
NCBI-ProteinID:
XP_021558373
UniProt:
A0A2Y9I3D8
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Position
3:149040656..149128020
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AA seq
929 aa
AA seq
DB search
MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKAIDAPVMAIKYYTSKISSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDHFSTQ
YVLDGSGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYG
ILKPDLRIVFIHNKAVIWQKTRVSDHKMALMSVLGTGVMGNMESFQYHSEESQIYLSGFL
PKHDADHSLTSLSTPERSFIFINSRPIHQKDILKVIRHYYNLKCLKESTRLYPIFFLKID
VPTADVDINLTPDKSQVLLQNKESVLTALENLMTTCYGSLPSTNSYENNKTDVSSADMVV
SNTTETDVLFNKMESSGNNYPNVDSSAIPFQNDVHNDKSGKNTNYCLNHQVHVDDHYDNF
NSENSNVDKNTRNTFQQIPVNNLSCEDAQKECSETCFVSSVKHTQSENGNKNSRDESRKN
EEAAVPEKSLEICADDWSKGNTLKNSMGENIEPVKILVPQESSVCKLNNNAYPSPEQKNL
SEGSCNKKSNVVDNKSGQLTAYDLISNRVIKKPMSASALFVQDHRAQFLTENPKTNLEDT
TVQIEELWKTLSEEEKLKYEEKATKDLERYNRQIKRAIEKEPQISFKDGRKKIKPTSAWN
LAQKHKLKTSLSNQPKVDELFQSQIEKKNQNIKIVQIPFSMENLKKNFEKHKIDLEEKEE
LCLLHNLKFPDAWLITSKTEIMLLNPYRVEEALLFKRLIENHKLPAEPLEKPIILTENLF
NGSHYLEILCKMTTDDQRYSGSTYLSDPRLTANGFKIKWIPGVSIAEDYLEIEEMANCLP
FYGVMDLKEILNSILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDVQDIIYR
MKDQFGNEIKGCVHGRPFFHHLTHLPETT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgcctgcagcaacagtgcgcctcctttcaagttctcaaataatcacttca
gtggtcagtgtggttaaagagctcattgaaaactccttggatgcaggtgccacaagcata
gatgttaaactggagaactatggatttgataaaattgaggtgcgagacaatggtgagggt
atcaaggccattgatgcacctgtaatggcaataaaatactatacttcaaaaataagtagt
catgaagatcttgaaaatttgacaacttacggttttcgtggagaagccttgggatcaatt
tgttgtgtagctgaggttttaattactacaaggacagcttctgatcattttagcacccag
tatgttttagatggtagcggccacataatttctcaaaaaccttcacatcttggtcaaggt
acaactgtaactgctttaagattgtttaagaatctacctgtaagaaagcagttctactca
actgctaaaaaatgtaaagatgaaataaaaaaggtccaggatctcctcataagctatggt
atacttaaacctgacttaaggattgtttttatacataacaaggcagttatttggcagaaa
actagagtatctgatcataagatggctctcatgtctgttctggggactggcgttatgggc
aatatggaatcctttcagtatcactctgaagagtctcagatttatctaagtggatttctt
ccaaagcatgatgcagaccactctttaacaagtctttcaaccccagaaaggagttttatc
tttataaacagtcgaccaatacatcaaaaagacatattaaaggtaatccgacattattac
aatctgaagtgcctaaaggaatctactcgcttgtatcccattttctttctgaaaattgat
gttcctacagctgatgtggacataaatttaacaccagataaaagtcaagtgttactacag
aataaggaatctgttttaactgctcttgaaaatctgatgacgacttgttatggatcacta
cctagtacaaattcttacgaaaataataaaacagatgtttcctcagctgacatggttgtt
agtaatacaacagaaacagatgtgctttttaataagatggaatcatctggaaataattat
ccaaatgttgattcttcagccattcctttccaaaatgatgtgcataatgataaatctggg
aaaaacactaattattgtttaaatcatcaggtacatgttgatgaccattatgataatttt
aatagtgaaaattctaacgttgataaaaacactagaaatacatttcaacagatcccagtg
aataatttatcatgtgaggatgcccagaaggaatgtagtgaaacttgttttgtaagttct
gttaagcatacccaatcagaaaatggcaataaaaacagtagagatgagagtaggaaaaat
gaggaagcagcagttcctgagaagtctttggaaatctgtgcagatgactggagcaaggga
aatacacttaaaaattcaatgggagaaaacattgaacctgtgaaaattttagtgcctcaa
gaaagttcagtatgtaaactcaataataacgcttatccaagccctgaacaaaagaatctc
agtgaaggttcctgtaacaaaaaatcaaatgtggtagataacaaatctggacagcttaca
gcgtatgatttaattagcaatcgggtaatcaagaaacccatgtcagcaagcgcccttttt
gttcaagatcatcgtgctcagtttctcacagaaaatcctaagaccaatttggaggataca
acagtacaaattgaagaactgtggaagacattgagtgaagaggaaaaactgaaatatgaa
gagaaggctactaaagatttggaacgatacaataggcaaatcaagagagccattgaaaag
gagccacaaatatcatttaaggatggcagaaaaaagataaagcccaccagtgcatggaat
ttggcacagaagcacaaattgaaaacttcattatctaatcagccaaaagttgatgagctc
tttcaatcccaaattgaaaaaaagaaccaaaacattaaaatagttcagatccccttttct
atggaaaacttaaaaaaaaattttgagaaacataaaattgacttagaagagaaggaggaa
ctttgcttgcttcacaatctcaagtttcctgatgcgtggctaattacatccaaaacagag
ataatgttattaaatccttacagagtggaagaagccctgctatttaaaagacttattgag
aatcataaacttcctgcagagccactggaaaagcccattatattaacagagaatcttttt
aatggatctcattatttagagattttatgtaaaatgaccacagatgatcagagatatagt
ggatcaacttacctgtctgatcctcgtctcacagcaaatggtttcaagataaaatggata
ccaggtgtttccattgccgaagactacttggaaatagaagaaatggctaattgtctccca
ttctatggagtgatggacttaaaagaaattcttaattctatattaaacaaaaatgcaaag
gaagtttatgagtgtagacctcgcaaagtgataagttatttagagggagaagcagtgcgt
ctatctagacagttgcccatgtacttatccaaagaggacgtccaagacattatctacaga
atgaaggaccaatttggaaatgaaattaaagggtgtgttcatggtcgcccattttttcat
catttaacccatcttccagaaactacctga
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