Neomonachus schauinslandi (Hawaiian monk seal): 110591963
Help
Entry
110591963 CDS
T08474
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04622
RIG-I-like receptor signaling pathway
nsu05161
Hepatitis B
nsu05162
Measles
nsu05164
Influenza A
nsu05168
Herpes simplex virus 1 infection
nsu05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
110591963 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
110591963 (IFIH1)
05171 Coronavirus disease - COVID-19
110591963 (IFIH1)
05164 Influenza A
110591963 (IFIH1)
05162 Measles
110591963 (IFIH1)
05168 Herpes simplex virus 1 infection
110591963 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nsu04054
]
110591963 (IFIH1)
Enzymes [BR:
nsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110591963 (IFIH1)
Pattern recognition receptors [BR:
nsu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
110591963 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
SNF2-rel_dom
Cas3-like_C_2
DUF3638
Motif
Other DBs
NCBI-GeneID:
110591963
NCBI-ProteinID:
XP_044769251
UniProt:
A0A8M1M5V5
LinkDB
All DBs
Position
3:complement(124627965..124681259)
Genome browser
AA seq
1026 aa
AA seq
DB search
MSNGYSADKSFCYLISCFRARVKTYIQVEPVLDYLNFLPDEVKEQIQRTAINAGNMQAAD
QLLSTLEKGGWPPGWTRQFLVALQRAGSVLAARYLNPELTDLPSPSSEDVHDECLQLMNL
LQPTLVDKLLVRDILDKCVEKELLTNEDRNRISAAESNGNESGVRELLKRIVQKENWFSA
FLIVLHQTENHALIQELTGTTCFESNAETENLSQEGGPDIQEAVLLATGQPSPEREGWGE
ESDSLESSLVDSSVVSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEENVAERA
SSEPELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVI
VLVNKVPLVEQLFRKEFEPFLKKWYHTIGLSGDTQLKISFPEVVKTYDVIISTAQILENS
LLNSEKGEDDGVQLSDFSLIVIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKECKPVIP
LPQILGLTASPGVGGAKRQAEAKEHILKICANLDACTIKTVKENIDQLKDQIKEPCKKFA
IADDTREDPFKDKLLEVMNKIQSFCQMSPMSDFGTQPYEQWTTQMEKKAAREGNRKERVC
AEHLRKYNEALQINDTIRTIDAYNHLEAFYNDEKEKKYAVQEDDSDESGEDGDGDGDEDE
DDEKKPLSLDRTDRFLMDLFFENRRLLKKLAENPKHENEKLTKLRNTIMEQYTRTEESAR
GIIFTKTRQSAYALSQWITENKKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRT
GKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSNSGV
IEREIVNDFREKMMYKAIDHVQNMNPEEYARKILELQMQSIMEKKMKIKRSIAKHCKENP
SLINFLCKNCSVLACSGEDIHVIERMHHVNMTPVFKELYIVRENKALRKKFVDYQTNGEI
ICKKCGQAWGTMMVHKGLDFPCLKIKNFVVVFKNNTPKKQYKKWVELPITFPDLDYSQYC
LCSDED
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatggctactcggcagacaagagtttctgctatctcatctcgtgtttcagggcc
agagtgaaaacgtacatccaggtggagcccgtactggactacctgaactttctgcccgat
gaggtgaaggagcagattcagaggacggccatcaacgctgggaacatgcaggcagctgat
caacttctgagcactttggagaagggaggctggccccctggctggaccagacaatttctg
gtggctcttcagagagcaggcagcgttttagccgcccgctacctgaacccagagctcact
gacttgccttctccatcctctgaggacgttcatgatgagtgtctccaactaatgaacctc
ctccagcccaccctggtggacaaacttctggttagagatatcttggataagtgtgtggag
aaggaactgttgacaaatgaagacagaaatcggatttctgctgcagaaagcaatggaaat
gaatcaggtgtaagagagctactgaaaaggatcgtgcagaaagaaaactggttttctgca
tttctgattgttctgcatcaaacggaaaaccacgcccttatccaagagctaacaggcacc
acttgctttgaaagcaatgcagagactgagaacttatcccaagaaggtggccccgacatt
caagaggcagttcttttagccacaggtcagccaagtccagagagagagggctggggcgag
gagagtgattcgctggaatcgtctttggtggattcttctgttgtttcagaatcagacaca
agtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatg
ggcagtgattcaggcaccatgggaagtgattcagatgaagagaatgtggcagaaagagca
tcttctgagccagaactgcatctcaggccttaccaaatggaagtcgcccaaccagccttg
gaggggaaaaatatcattatatgcctccctacagggagtgggaaaaccagagtggctgtt
tacattgccaaggatcacttggacaagaagaaaaaagcatctgaacctggaaaagttata
gtccttgtcaataaggtgccactagttgaacagctcttccgcaaagagtttgaaccattt
ttgaagaaatggtatcatacaattggattaagtggagatacccaattaaaaatatcattt
ccagaagttgtcaaaacctatgatgttatcatcagtacagctcaaatccttgaaaactcc
cttttaaattcagaaaaaggagaagatgatggtgtccagctttcagacttttccctcatc
gtcattgatgaatgccatcacaccaacaaagaagcagtctataataacatcatgaggcgt
tacttgaaacagaagttgaaaaacaataaactcaagaaagaatgcaaaccagtgattcct
ctacctcagatactaggactaacagcttcaccaggtgttggaggagccaaaaggcaagct
gaagccaaggaacacattttaaaaatatgtgccaatctcgatgcatgtaccattaaaact
gtgaaagaaaatattgatcaactcaaagaccaaataaaagagccatgcaaaaagtttgca
attgcagatgacaccagagaagatccatttaaagataagcttttagaagtaatgaacaag
attcaaagtttttgccaaatgagtccaatgtcagattttggaactcaaccctatgaacaa
tggaccactcaaatggaaaagaaagctgcacgagaaggaaatcgcaaagaacgtgtttgt
gcagagcatttgaggaagtataatgaggccctacaaattaatgatacaattcgaacaatt
gatgcatataatcaccttgaagctttctataatgatgagaaagagaagaagtatgcagtc
caagaagatgatagtgatgagagtggtgaggatggtgatggtgatggtgatgaagatgaa
gatgatgaaaagaaacctttgagcctggataggacagatagatttctcatggatttattt
tttgaaaacaggagactgttgaaaaagctggctgaaaacccaaaacatgaaaatgaaaag
ctgaccaaattaagaaacaccataatggaacaatatacaaggactgaggaatcggcccga
ggaataattttcacaaaaacacgacagagtgcatatgccctttctcagtggattactgaa
aataaaaaatttgcagaagtaggagtcaaagcccatcatctgattggagctggacacagc
agtgagttcaagcccatgacacagaatgaacaaaaagaagtcattagtaaattccgcaca
ggaaaaataaatctgctcatcgctaccacagtggcagaagaaggtctggatattaaagaa
tgtaatatcgttattcgttacggcctcgtcactaatgaaatagccatggtccaggcccgt
ggtcgagccagagctgatgagagcacctacgtcctggttgcccacagtaactcaggagtt
attgaacgtgagatagttaacgatttccgagagaaaatgatgtataaagctatagaccat
gttcaaaatatgaacccagaggagtatgctcgtaagattttggaattacagatgcaaagt
ataatggaaaagaaaatgaaaatcaagagaagtattgcaaagcactgcaaggaaaaccca
tcattaataaatttcctctgcaaaaactgcagtgtgctagcctgctctggagaagatatc
cacgttattgagaggatgcaccacgtcaacatgacaccagtattcaaggaactctacatt
gtgagagaaaacaaagcactacgaaagaaatttgtagactatcaaacaaatggcgagatt
atctgcaaaaaatgtggccaagcttgggggacgatgatggtgcacaaaggcttagatttt
ccttgtctcaaaataaagaattttgtagtggttttcaaaaataatacaccaaagaaacaa
tacaaaaagtgggtagaattacctatcacatttcccgatcttgactattcacaatattgt
ttgtgtagtgatgaagattga
DBGET
integrated database retrieval system
