Neomonachus schauinslandi (Hawaiian monk seal): 110592015
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Entry
110592015 CDS
T08474
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110592015 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110592015 (BARD1)
04121 Ubiquitin system [BR:
nsu04121
]
110592015 (BARD1)
03036 Chromosome and associated proteins [BR:
nsu03036
]
110592015 (BARD1)
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110592015 (BARD1)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110592015 (BARD1)
Ubiquitin system [BR:
nsu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110592015 (BARD1)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110592015 (BARD1)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110592015 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
zf-C3HC4
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
110592015
NCBI-ProteinID:
XP_021558665
UniProt:
A0A2Y9IB76
LinkDB
All DBs
Position
3:complement(171010710..171089939)
Genome browser
AA seq
773 aa
AA seq
DB search
MPGNRRPRVRSGNEPRPAPTMEPEGRGAWAHSRAALDRLEKLLRCSRCTHILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDDKLSDLKE
DTSRENLFNDAENKKNSIKMWFSPRSKKVRYVVSKVSVQTQPQVINDENAQQASMYEFVS
TSPPTSVSEKAKKASPRSGKKQKKKTLAEINQKWNLEAEKEDGELDSKEELKEKLVSFCN
QPSVIASPQTNGEIDLLASGSAVESQGCGSLTEVSLPVAEHIESPATESRNEEVTPEKKL
CANPRPSKQCLLSGPSGRCARRSRRSSPVPKRCRSSIPGTSRQHIVLSENKPSPGCPSPP
SSKLKVGDTLRRRKSNVSDESMSLSRGMPPAALNSPSYRRMMSSPSAAKLSPTSLMAVKR
NHRGETLLHIASIKGDVPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK
ALVNTTGYQNDSPLHDAAKNGHLDIVKLLISYGASRNAVNIFGLRPVDYADGENMKSLLL
LPEKNESSSTRHCSVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDNTV
THVIVPGDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEQEEKYEIPEGPRQSRLNK
EQLLPKLFDGCYFYFGGTFKHHPKDNLIKLVAAAGGQVLSRKPKPDSDVTQTINTVAYHG
RPDSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggcggccgagggtccgctccgggaacgagcctcgtcctgcgcccacc
atggagccggaggggcgcggggcctgggcccacagccgcgccgcgctcgaccggctggag
aagctgctgcgctgctcgcgttgcactcatattctgagggagcctgtgtgtttagggggg
tgtgagcacatcttctgtagtaattgcgtaagtgactgcattggaaccggatgtccagtg
tgttataccccagcctggatacaagatgtgaagataaatagacaattggacagcatgatc
cagctttgtagtaagcttcggaatttgctacatgatgataagctttcagatttgaaagaa
gatacatctagggaaaatttatttaatgatgcagaaaataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgtcgtgagtaaagtttcagtgcaaacc
cagcctcaagtgataaatgatgagaatgctcagcaggcttccatgtacgaatttgtttct
acaagtcctccaacaagtgtttctgagaaggctaaaaaggcttctccaagatctggaaaa
aaacagaagaagaaaactttagctgaaatcaaccaaaaatggaacttggaggcagaaaaa
gaagatggtgaacttgactccaaagaggaattaaaggaaaagctggtgtccttctgcaac
cagccgtctgttatcgctagtcctcagacaaatggtgagatagacttactcgccagtggc
tctgccgtggaatcacagggttgtggcagcctaactgaagtctctttaccagtggctgag
cacatagagtccccagcaacggagagcaggaatgaagaagtgactcctgagaagaagctc
tgtgcaaatcctcgtccatctaagcagtgcttgctgtcaggtcccagtgggcgatgtgcg
cgtcgcagcagacggtccagtcccgtccctaagagatgtaggagcagcattcctggcacc
agcagacagcacatagtgctttcggaaaacaaaccgtcgcctggctgcccctcaccaccc
tcaagcaaactcaaagttggtgacacattaaggcggagaaagagtaatgtatcagatgag
tccatgagcctctcacgaggtatgccacctgctgcactgaacagcccaagttacagacgg
atgatgtctagcccctcagcagcgaagctgtcacccactagccttatggctgtgaaaaga
aatcatagaggagagactctgctccatattgcttccattaagggcgacgtaccttctgtt
gagtacctcttacaaaatggaagcgacccaaatgttaaagatcatgctggatggacacca
ttgcatgaagcctgcaatcatgggcacctgaaggtagtggagttgttgctacagcacaag
gcattggtgaacaccactggctatcagaacgactcaccgcttcatgatgccgccaagaac
gggcacctggatatagtcaagctcttaatttcctacggagcctccaggaacgccgttaac
atatttggtttgcggcctgtggattatgcagacggtgaaaatatgaaatcactattgctg
ctgccagagaagaatgaatcatcatcaactcgccattgctcagtaatgaacactggtcag
cgtagggatggacctcttgtgcttataggcagtgggctttcttcagaacaacaaaaaatg
ctcagtgagcttgcagcaattcttaaggctaaaaaatgtgctgaatttgacaatacagta
actcatgtcattgttcctggggatacagttcaaagtaccctaaaatgtatgcttgggatt
ctcaatggatgttggatcttaaaatttgaatgggtgaaagcatgtctacagagaaaagca
tgtgaacaggaggaaaaatacgagatccctgaaggtccacggcaaagcaggctcaacaag
gaacagctgttgccaaagctgtttgatggatgctacttctattttgggggaaccttcaaa
caccatccaaaggacaaccttattaagcttgttgctgcagcagggggccaggtccttagt
agaaagcccaagccagacagtgacgtgactcagaccatcaatacagttgcgtaccacggg
agacctgattccgatcagcgcttctgcacacagtatatcatctacgaagatttgtctaat
catcgcccagagagggttcggcagggcaaagtctggatggctccttccagctggtttatt
gattgtgtgatgtcctttgagttgctccctcttgacagctga
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