Neomonachus schauinslandi (Hawaiian monk seal): 110592295
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Entry
110592295 CDS
T08474
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110592295 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsu03041
]
110592295 (SF3B1)
03036 Chromosome and associated proteins [BR:
nsu03036
]
110592295 (SF3B1)
Spliceosome [BR:
nsu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110592295 (SF3B1)
Complex B
110592295 (SF3B1)
Complex C
U2 SnRNP specific factors
110592295 (SF3B1)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110592295 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
110592295
NCBI-ProteinID:
XP_021558915
UniProt:
A0A2Y9IBZ1
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All DBs
Position
3:complement(155716367..155753586)
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AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgcgaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgacagccgatttgctggatatgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccgggatatcatgcccctgtggcattgcttaatgatataccgcaatctacagaacag
tatgatccatttgctgagcacagacctccgaagattgctgaccgggaggatgaatacaaa
aagcacaggcggaccatgataatatccccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaacgctaggacttacatggatgtaatgcgagaacagcat
ttaactaaagaagagagagaaattaggcagcagctagcagaaaaagctaaagctggagaa
ctaaaagttgtcaatggagcagcagcatcccagcctccctcaaaacgaaaacggcgttgg
gatcaaacagccgatcagactcctggtgccactcccaaaaagctgtcaagttgggatcaa
gcagagacccctggacataccccttccttaagatgggatgagacgccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagtcac
acaccagcgggagctgctactcctggacgtggggatacaccaggccatgcaacaccaggc
catgggggcgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaacagaa
agagatactcctgggcatggaagcggatgggctgagactcctcgaaccgatcgaggtgga
gattcaattggtgaaacaccaactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccggctagtcagatgggtggaagcactcctgttctgacccctggaaagacaccaatt
ggcacaccagcaatgaacatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcggtgggaaagagaaattgatgagagaaaccgcccactttct
gatgaagaattagatgctatgttcccagaaggatataaggtacttccccctccagctggt
tatgttcctattcgaactccagctcgaaagctgacagcaactccaacacctttgggcggc
atgactggtttccacatgcaaactgaagatagaacaatgaaaagtgttaatgaccagcca
tctggaaatcttccatttttaaaacccgatgatattcagtactttgataaacttttggtt
gatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaagctg
cttttaaaaattaagaatggaacacctccaatgagaaaggccgcattgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctctcctgatg
tctcctacacttgaggatcaagagcgtcatttacttgtcaaagttattgatcgaatatta
tacaaacttgatgacttagttcgaccatatgtgcacaagatccttgtagtcattgaacca
ttattgattgatgaagattactatgctagagtggaaggtcgagagattatttctaatttg
gcaaaggctgctggtctggctaccatgatctctaccatgagacctgatattgataacatg
gatgagtatgtccgtaacacaacagctagagcttttgctgttgtagcctctgccctgggc
attccttcattgttgcccttcttaaaagctgtgtgtaaaagcaagaagtcctggcaagca
agacatactggtattaagattgtacagcagatagctattcttatgggctgtgccatcttg
ccacatctcagaagtttagttgaaatcattgaacatggtcttgtggatgagcaacagaaa
gttcggaccattagtgctttggccattgctgccttggctgaagccgcaactccatatggt
atcgaatcttttgattctgtgttaaagcctctgtggaagggtatccgccaacacagagga
aagggtctggctgccttcttaaaagctattgggtatcttattcctcttatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattcgagaatttcaatctcct
gatgaagaaatgaagaaaattgtgctgaaggtggtaaagcagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagattcttcctcctttttttaaacacttctggcaa
cacagaatggctttggatagaagaaattaccgacagttagttgatactaccgtggagttg
gcaaacaaagtaggagcggcagaaattatatccaggattgtggatgatctgaaagatgaa
gctgaacagtacagaaaaatggtgatggagacaattgagaaaattatgggcaacttggga
gcagcagatattgatcataaacttgaagaacagctgattgatggtattctttatgctttc
caagaacagactacagaggactcagtaatgttgaatggctttggcacagtggtcaatgct
cttggcaaacgagtcaaaccttacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatcagctaaagttaggcaacaggcagctgacttgatctctcgaactgctgtt
gtcatgaagacttgtcaagaggaaaaattgatggggcacttgggtgttgttttgtatgaa
tatttgggtgaagagtaccctgaagtattgggcagcattcttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctcctgcctagactc
acccccatcttaaagaacaggcatgaaaaagtacaagaaaattgtattgatcttgttgga
cgtattgctgacaggggagctgaatatgtgtctgcaagagaatggatgaggatttgtttt
gagcttttggagctcttaaaagctcacaaaaaagctattcgtagagccacagtcaacaca
tttggctacattgcaaaggccattggccctcatgatgtattggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctatcgtcgcc
gaaacgtgttcacccttcacagtactacctgccttaatgaatgaatacagagttcctgag
ctgaatgttcaaaatggagtgttaaaatcactttccttcttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccattacttgaagatgctttaatggatagg
gaccttgtgcacaggcagacggctagtgcagtggtgcaacacatgtcacttggggtttat
ggatttggttgtgaagattcactgaatcacttgttgaactatgtatggcccaatgtgttt
gagacatctccccatgtaattcaggcagttatgggagccctggagggcctgagagttgcc
attggaccatgtagaatgttgcagtattgtttacagggtttgtttcacccagcccggaaa
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaacgatgataagaacacctatattcgttacgaactt
gactatatcttataa
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