Neomonachus schauinslandi (Hawaiian monk seal): 110592369
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Entry
110592369 CDS
T08474
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A isoform X1
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03250
Viral life cycle - HIV-1
nsu03272
Virion - Hepatitis viruses
nsu04144
Endocytosis
nsu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110592369 (VPS4A)
03272 Virion - Hepatitis viruses
110592369 (VPS4A)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110592369 (VPS4A)
09143 Cell growth and death
04217 Necroptosis
110592369 (VPS4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsu04131
]
110592369 (VPS4A)
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110592369 (VPS4A)
Membrane trafficking [BR:
nsu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
110592369 (VPS4A)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
Check point factors
Other check point factors
110592369 (VPS4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
TIP49
AAA_16
AAA_22
AAA_14
AAA_5
AAA_25
IstB_IS21
RuvB_N
DUF815
AAA_17
AAA_2
nSTAND3
AAA_33
AAA_18
NPHP3_N
RNA_helicase
AAA_24
PhoH
ResIII
NACHT
AAA_28
Mg_chelatase
YCII
Parvo_NS1
AAA_7
YhdB
DUF5906
bpMoxR
Sigma54_activat
Guanylate_kin
ABC_tran
AAA_30
Viral_helicase1
TPR_IF140_C
TPR_2
Motif
Other DBs
NCBI-GeneID:
110592369
NCBI-ProteinID:
XP_021559006
UniProt:
A0A2Y9I5M4
LinkDB
All DBs
Position
16:42578661..42589868
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AA seq
437 aa
AA seq
DB search
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSEKAKESIRAKC
MQYLDRAEKLKDYLRSKEKHGKKPVKENQSESKGSDSDSEGDNPEKKKLQEQLMGAVVME
KPNIRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEAKNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFRLHLGSTPHNLTDANVHELARKTEGYSGADISIIVRDSLMQPVRKVHSATHFKKVCG
PSRTNPSVMIDDLLTPCSPGDPGAMEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNA
DDLLKVKKFSEDFGQES
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcaaccctccagaaagccattgatctggtgacgaaagccacggaggaggat
aaagccaagaattacgaggaggcactccggctctaccagcatgctgtggagtatttccta
catgctatcaaatatgaggcacacagcgaaaaggccaaggagagcattcgagccaagtgc
atgcagtacctagaccgggcggagaagctgaaggattacttacgaagcaaagagaagcat
ggcaagaagccagtcaaagaaaatcagagtgagagcaagggcagtgatagtgacagtgaa
ggggataatcccgagaaaaagaaattgcaagaacaactgatgggtgctgttgtgatggag
aagcccaacattcggtggagtgatgtggctgggctggagggggccaaggaggccctcaaa
gaagctgtcattttgccaattaaattcccacacttgttcacaggcaagcgtacaccttgg
cgagggatactgctctttggaccccctggcacagggaaatcctacctggccaaagcggtg
gccacagaggccaaaaactccaccttcttctctgtgtcctcctcagacttgatgtctaag
tggttgggggagagtgagaagctcgtcaagaacctgtttgagctggccaggcagcacaag
ccctccatcatcttcatcgatgaggtggattccctctgcgggtcccgcaatgaaaatgag
agcgaggctgcccgaaggatcaaaacggagttcttggtccagatgcagggggtggggaat
aacaacgatgggactctggttcttggtgccacaaatatcccctgggtgttggattcagcc
attagaaggaggtttgaaaagcggatttacattccgctgcctgaggaggctgcccgtgcc
cagatgttccggttgcatctggggagcactccccacaacctcacggatgccaacgtccat
gagctggcccggaagacggaaggctactcaggtgctgacatcagcatcattgtgcgggac
tccctcatgcagcctgtcagaaaagttcattcagcaacacacttcaaaaaggtctgtggc
ccttcccgcaccaaccctagcgttatgatcgatgacctcctgaccccatgctcaccaggg
gacccaggggccatggagatgacttggatggatgtccctggtgacaaactcttagagcct
gtggtttgcatgtcggacatgctccggtctctggccaccactcgacccaccgtgaatgca
gacgacctcctgaaagtgaagaaattctcagaggactttggacaggagagttaa
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