Neomonachus schauinslandi (Hawaiian monk seal): 110592392
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Entry
110592392 CDS
T08474
Symbol
RIF1
Name
(RefSeq) LOW QUALITY PROTEIN: telomere-associated protein RIF1
KO
K11138
telomere-associated protein RIF1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
110592392 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsu03032
]
110592392 (RIF1)
DNA replication proteins [BR:
nsu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110592392 (RIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
Motif
Other DBs
NCBI-GeneID:
110592392
NCBI-ProteinID:
XP_044769224
UniProt:
A0A8M1MDX9
LinkDB
All DBs
Position
3:115336640..115395792
Genome browser
AA seq
2480 aa
AA seq
DB search
MTAPGESPLAPLLETLEDPSAPHGEQTDAYLTLTSRMTGEDGKEVIMEIEKKLPQLFRVL
KIHISSQDSDLSCAALQALGFCLYNPKITSGLSETDIQELLLKLNDSVKSPDKNVRTRAL
WVISKQTFPGEVIGRVVSSIIDSLEIIFNRGEVHSAVVDYEALNVIIRLIEQAPVQMGEE
SIRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVRLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQSSLSRVTASPGLSPMTPIHKGASPYGTPVAPRMNLSSNFGGM
ATIPSIQLLGLEMLLHFLLGPEVLSFAKQNKLVLSLEPLEHALISSSSFFSKHANTLITA
VHDSFVAVGKDASDAVVNAIWKELISLMKSVIESGNKKERPGSEVLTLLLKSLESIVKSE
VFPVSKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLEYGVDD
ERFFLNLETLVGCVLSGPTSPLAFSDSVLNVINQNAKLLENKEHLWRMWGIIVTPLTELI
NQTNEVNQGDALEHNFSAIYGALTLPINHIFSVQKFPVATMKTLLRTWSGLYRAFARCAA
LVATAEENLCCEELASKIMSSLEDSGFSNLLFLDRIVHIITVMVDCIDFSPYNTKYQPKV
KSPQRPSDWSKKKKEPLGKLASLFKLTVRVIYSFHTLSFKEVHSDTLLTVGNSITSILSN
VLGRISLSSMIRKIFATLTRPLALFYENLKLDEVPKVYSCMSNKLEKLLGEIIACLHFNY
TGTYDSELLEHISPLLCIIFLHRNKQIRKQSAQFWNATFAKVSTLTYPEELKPVLRQAKE
KFLLLLPGLENVEIMEESSGPYSNATENSQLNMKISGMERKSSGKRDSFLAQTKDAKENK
KPPVKLKLESSSAKTKSEMPLEEEESIDFVFIPPEGKEAKERILTEHQKEVFKTKRCDIP
VMYNNLDVSQDTLFSQYTQEESMEIPALTEKSKEDSKVIPKEEQMESDIVISQDVMENCG
MDEHLEKVSLSNNDCDSNEETSPEVPSSNNDARKKALISSKKTTECVSNAENTSGLNSSS
VSNTIISGTPPQPTSRRQTFITLEKFDGSENRPFSPSPLNNMSSTVTVKNNQEVMGKTDT
PPKAKKREMVSAKCDSEKIAHGIKRSSRRSSKAEQIGNKRSKLLMRSDQEKNTQESIDGT
VVLENNPPGLLNQTECVLDNQAHLSESVMEYEDTMLKPTIENVVLLENNTVEEKTLGINL
ESKENTPPAIIPADQMVDEDSPVQITPNQKTLRRSSRRRSEVAEPTTDSQEKENNHQKKE
RRKEEEKTLHKSPLHVKDDVLPKQKLISEQTVQENLIEKGNNVHEKTFGETSTTAEIDEN
KRKLDLENTKSEGDGAQDFADKSSEKPVSGRTRYQTRRASQGLLSSIENSESDSSEAKEE
GSKKKRSGKWKNKSSDSVDIEDQEEKVIKQECVNVDNQTLDCKANSEVERDLKSQICEQK
DESNNVTLEDSTVSSDLLQISDDVSTTYEGKSKTNKCTEYSFSNPSVPESNLRTRNASKR
LQKRDSTENDTVGESSKIGTSDISLLSEKTFQTLECQHKRSRRVRRSKGCDCCGEKSQPQ
EKSFIGLKNTENYDVKVNETKKTDMQTPVNVSETSKANLCSEVKLSDEHNGVNFHLGLKE
ESDAVNDSLIISESELKENTIQNPLPSEVVNFEEETCDMVSEEAAPLESQEPSNKKCKTV
SPCLGDSRDNSLECSTLETKEEKSEAILEKELSIENIVNVETDACKAKAKFIPEEVEAIE
LDVESDKSEASFSEQKSTETGISEEEVMEINSERSDESEAEAAEKLKAEEAVTEEFNSGV
GHSDNTTEMSAQVEIPEQTAVGELGERSDESGPGSSEEMNAEMENCEETVIGEVSAEADQ
VNETEDRDSTTKISTKPVQAETKTSTMEIGSFVLNTLGMSTEEGKVDSNETETNTELSKS
EETTSDDNRVVGGNDEILQEVHHTSEKVEETSQSLTSETAISELITEDNNASPQKLRELD
PLLVSANGSPSGMQTRCVWSPLASPSTSILKRGLKRPQEDEISSPVHKVRRVSFADPIYQ
AGLADDIDRRCSIVRSHSSNNSPIVKSVKTSPTAQSKHNATSTKGFLSPGSRSPKFKSSK
KCLITEMAKESMPCPTESVYPALVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGD
LSTLTASEIKTLPIRSPKVSNVKKALRVYHEQQVKSRGLEEIPVFDISEKTVNGIQTKSL
PSDEERLASDLIDPVALETPLPKNLVAQISALALQLDSEDLHNYSGSQLFEMHEKLGTMA
NSIIKNLQSRWRSPTHENSV
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccgggtgagagccccctggcgccgctgttggagactttggaagacccttcc
gccccccatggagagcaaaccgacgcttacctgactctgaccagtcgcatgactggagaa
gatggaaaagaagtcattatggaaattgagaaaaaactccctcagctattcagagtttta
aaaattcacatttccagtcaggattcagacctcagttgtgctgctctacaggccttgggg
ttttgcttatataatcccaaaattacctcaggattatcagagacagatattcaagaactg
cttttaaaattgaatgatagtgttaaaagcccagacaaaaatgtacgtactagggcactt
tgggtgatatccaagcagacgtttcctggtgaagtcattggcagagtagtatccagtata
attgattcattagaaataatatttaatagaggagaggtgcattctgctgttgttgattat
gaagcattaaatgtcatcataaggctaattgaacaagccccagttcaaatgggagaagag
tcaattaggtgggcaaaactggtcatacctttagtggttcattcagctcaaaaggtacat
ttgcggggagcaactgctctagagatgggaatgccattgttgcttcagaaacaacaagaa
atagcatctatcacagagcagcttatgactactaaattactttcagaactccaaaagcta
tttatgagtaagaatgagacttatgtgttaaaattgtggcctttgtttgtcagacttctt
gggaagaccttgcatcgaagtgggagtttcattaattctctattacagctggaagaacta
ggatttcgcagtggagcacccatgattaaaaaaatagcttttattgcttggaagagttta
atagataattttgctttgaatccagaaatactatgcagtgcaaaaaggctgaagttgtta
atgcagcctttgagttccatccatgtgagaacagaaactctagcactaacaaagctagaa
gtctggtggtatctactgatgagacttggacctcatcttcctgctaattttgaacaggtg
tgcgtgcctctgattcagagtacaataagcatcgattctaatgcttcacctcaaagcagt
ttgtctcgtgtaactgcttctccaggtttaagtcctatgactcctatacacaaaggtgct
tccccatatggaactcctgtagctccccggatgaacttaagttcaaattttggtggaatg
gccacaatcccctctattcaacttttgggacttgaaatgctgcttcattttttgttgggt
ccagaagtcttgagttttgctaagcaaaacaaacttgtactgagcttagagccactcgaa
catgcgttaatcagcagctcttcttttttttccaaacatgcaaatacacttatcactgct
gttcatgatagctttgttgcggttggaaaagatgcttctgatgcagttgtcaatgctatt
tggaaggagctaattagcttgatgaagtcagttattgaatcaggtaacaaaaaagagaga
ccaggttctgaagttttgaccctgttactaaaatctttagaaagcatagtgaagtcagaa
gtatttcctgtgtcaaaaacactggtcctcatggaaattacaattaaaggactgccccag
aaagtattaggttcaccagcatatcaggttgctaatatggatattcttaatggaactcct
gctttgttcttaattcagttaattttcaacaataatctcttggaatatggtgtagatgat
gagaggttttttctcaatctggaaacacttgttggctgtgtcctttctggtccaacttca
ccactagctttcagtgactctgttttaaatgttattaaccaaaacgcaaagctgttggaa
aacaaggagcatctctggagaatgtggggtattatagtcaccccattaacggaattgatt
aatcagaccaatgaagtgaatcaaggtgatgccttagaacataattttagtgccatatat
ggtgcattgactttaccaataaaccatattttttcagtacagaaatttccagtggccacc
atgaagaccttacttagaacttggtcaggattatatagagcatttgcccgctgtgctgct
ttggtggcaactgcagaagagaatttgtgctgtgaggaacttgcttccaagataatgtcc
agtttagaagattccggcttttcaaatttgttgttcttggataggatcgttcatataatt
actgtaatggtggattgcattgacttctcaccatacaatactaagtatcagcccaaagtt
aaatcaccacagagaccttcagattggtccaaaaagaagaaagaacctctagggaaattg
gcttctttatttaaacttactgtgagagtgatctattctttccacactctgagcttcaag
gaagtacattctgatactctcctcactgttggcaactcaatcaccagtattctttctaat
gtacttggacgtatttctttgtcttctatgatccgaaaaatatttgcaactttaacaaga
cctctggcattattttatgaaaacttaaagcttgatgaagttcctaaagtgtatagttgt
atgagcaacaagttagaaaagctactgggagagataattgcttgtctacacttcaactac
actgggacttacgacagcgaacttcttgaacacatctctccgttattatgcataatattt
ttgcacaggaataaacagattagaaaacaaagtgctcagttctggaacgccacatttgct
aaagtgtcaacgttgacttatcctgaagagttaaaaccagtactaagacaagccaaagag
aaatttctgttgcttttacctggtttggaaaatgttgaaattatggaggaatccagtgga
ccatattcaaatgcaacagaaaattcacagttaaatatgaagataagtggcatggaaaga
aaatcaagtggaaaaagagattcttttttggcacaaacaaaggatgcaaaagaaaacaag
aaaccaccagtcaaattgaaattagaatcgtcttctgccaaaacaaagagtgaaatgcct
ttggaagaggaagagtctattgactttgtgtttatacctccagaaggaaaagaagcaaag
gaaagaatactaactgaacatcagaaagaagtattcaaaacaaagagatgcgatattcct
gtcatgtataataatctggatgtttcacaagacactttgttttctcagtatacccaggaa
gagtccatggaaattcctgctttaactgaaaaatcaaaggaagattccaaggtgatacct
aaggaggaacaaatggaaagtgacattgttatttctcaagatgtcatggaaaactgtggt
atggatgagcatcttgaaaaggtttctctttcaaataatgactgtgattctaatgaggaa
acgagtccagaagtaccgagcagtaataatgatgccagaaagaaagctttaatttcatca
aagaaaacgaccgaatgtgtatctaatgcagaaaatacttctggtctcaacagtagctca
gtttctaataccattatttctggaactcccccacagcctacaagtcggaggcaaacgttt
attactttggagaagtttgatggttcagaaaatagaccttttagtccgtcccccttaaat
aatatgtcatcaactgtaacagtgaaaaataaccaggaagtcatgggtaaaacagatact
ccaccaaaagcaaagaaaagagaaatggtttctgcaaaatgtgattctgaaaaaatagca
catggaattaagagatcaagccgaaggtcaagtaaagctgaacaaatagggaacaaaagg
tctaaactcttaatgagatccgatcaagagaaaaatactcaggaatctattgatggcaca
gtagtcttagaaaataacccacctggtttgcttaatcaaacagaatgtgtgttagataat
caggctcatctctctgaatctgtgatggaatatgaggatacaatgcttaaaccaacaata
gaaaatgtagtattattagaaaacaatactgtagaagagaaaacattaggaatcaatttg
gaatccaaagaaaatacacccccagctataataccagcagatcaaatggtagatgaggat
agtccagttcagataactccaaatcaaaaaacgcttagacgatcctcaaggcgacgttca
gaagtagcagagcctaccactgacagccaagagaaagaaaataatcatcaaaaaaaagaa
agacgtaaggaagaagaaaagactcttcacaaaagtccgttgcatgtaaaagatgatgtg
ttacctaagcaaaaactgatttctgaacaaactgtacaggaaaatttaattgagaaagga
aataatgtacacgagaagacttttggggaaaccagcactactgctgaaattgatgaaaat
aaaagaaagctagaccttgagaatactaaatctgagggagacggtgcccaggactttgca
gataagtcctctgaaaaaccagtaagtggtcgaacacggtatcaaacaagaagagcatcc
caaggtttactttccagcattgaaaactcagaatctgatagttctgaggcaaaagaagaa
ggttctaaaaagaagagatctggaaaatggaaaaacaaaagcagtgatagtgttgacatt
gaagatcaggaggagaaagtgataaaacaggaatgtgtaaatgttgacaaccagacactt
gattgcaaagcaaattctgaagtagagagagacctaaaatctcagatttgtgaacaaaaa
gatgagagtaataatgtaactcttgaagattctacagtatcttcagatttattgcagatt
tctgatgacgtgtcaactacttacgagggaaaaagtaaaaccaacaaatgtacagaatat
tccttttcaaacccttctgtgccagaatcaaatctaaggactagaaatgccagcaagaga
ttacaaaaacgagattctacagaaaatgacaccgtgggagaatcctcaaaaatagggaca
tcagacatttctttgctttctgaaaaaacttttcaaacacttgaatgccagcataagaga
agtaggagggtaaggagatctaaaggttgtgattgctgtggagaaaaatcacagcctcag
gaaaagtcattcattgggttaaagaatacggaaaactatgatgtaaaagtcaatgaaaca
aaaaagacagatatgcaaacacctgtaaatgtatcagagacttctaaagctaatctgtgc
tctgaggtaaaactttcagatgaacataatggtgtgaattttcatttgggactcaaggag
gagagtgatgctgttaatgattcattaattatatctgaaagtgagttgaaagaaaatact
attcaaaaccctcttccttctgaagtagtaaattttgaagaagaaacttgtgatatggtt
tctgaagaagcagcacctcttgaaagccaagagccatccaataaaaaatgtaaaactgtt
agcccatgtttaggtgattccagagataattcactggaatgttctactttggagaccaaa
gaagaaaagtcagaggctatcttggaaaaggaattaagtatagagaacattgtcaatgtt
gaaacagatgcatgtaaagctaaagcaaaattcattccagaagaagtagaagctattgaa
ttggatgtagaaagtgataaatctgaagctagcttttctgaacaaaagagtaccgaaact
ggtattagtgaagaagaggtaatggagataaatagtgaaagaagtgatgaatctgaagca
gaggcagctgaaaaactgaaggctgaagaagcagtaactgaagaatttaattctggtgtt
ggtcattctgataataccacagaaatgagtgctcaggtagagatacctgaacaaacagca
gttggggaattaggtgaaagaagtgacgaatctggtccaggctcatctgaagaaatgaat
gctgaaatggaaaattgtgaagagacagtgattggtgaggtgagtgctgaagctgatcaa
gtcaatgaaacagaggacagggactcgactaccaaaatctctactaagcctgtacaagcc
gaaacaaagacttcaactatggaaatcggcagttttgttctcaacacacttgggatgagc
actgaagaaggaaaagttgactctaatgaaactgaaacaaatactgaacttagtaagtct
gaagaaacaacatcagatgacaatcgagtggtggggggaaatgatgagattttacaggaa
gttcaccatacttcagagaaagtggaggaaacatcacagtctctgacatctgaaacagcc
atctctgaactaataacagaagacaataatgcatctcctcaaaaattaagggaacttgat
cctttacttgtatcagcaaatggcagtcctagtggcatgcagacacgctgtgtatggtct
cctttggcttctccatcgaccagcattttaaagagaggactgaaaaggcctcaggaagat
gagatatcgtcacctgttcacaaggttcgccgtgtctcctttgcagatccaatataccag
gctggattggcagatgacattgataggcgatgctctattgttaggtcccattcttcaaat
aattctcccatagtaaaaagtgttaaaacttcacctactgcacaatctaagcataatgcc
acttcaaccaaaggatttctgtccccaggatcacgtagccctaagtttaagagctcaaag
aagtgtttaattacagaaatggctaaagaatctatgccatgtccaacagaaagtgtttac
ccagctttggtgaactgcgtggctccagttgatatcattttacctcagattacatcaaac
atgtgggcaagaggactgggacagctcattagagccaagaatataaaaacgattggtgat
ttgagtactcttacagcatctgaaataaaaactcttcctatccgttctccaaaagtgtcc
aatgtaaaaaaggctcttagagtctatcatgagcagcaggtaaagtctcgtggactagag
gagattccagtttttgatatttctgaaaaaacagtaaatggaatacaaactaaatctctc
ccttctgatgaagaaagacttgcctcagatttaattgatcctgttgctttggaaactcca
ttacctaaaaatcttgtggcacagattagtgcacttgctcttcaactagattctgaagat
ctccataattattcaggaagccagctgtttgaaatgcatgagaaacttggtaccatggcg
aactctataataaaaaatttgcagtcacgttggaggtcaccaacccatgaaaattctgtt
tag
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