Neomonachus schauinslandi (Hawaiian monk seal): 110592622
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Entry
110592622 CDS
T08474
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsu03009
]
110592622 (DDX56)
Enzymes [BR:
nsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110592622 (DDX56)
Ribosome biogenesis [BR:
nsu03009
]
Eukaryotic type
Pre-60S particles
Helicases
110592622 (DDX56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
110592622
NCBI-ProteinID:
XP_021559372
UniProt:
A0A2Y9I5V7
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All DBs
Position
12:complement(459266..466624)
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AA seq
545 aa
AA seq
DB search
MADPEALGFEHMGLDPRLLQAVADLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPVLQLLLHRKATGPAVEQAVRGLVLVPTKELARQARSMIQQLAAYCARDIRVANVSA
TEDSASERAVLMEKPDIVVGTPSRVLNHLQQNSLVLRDSLELLVLDEADLLFSFGFEEEL
KSLLCHLPRIYQAFLMSATFNEDVQALKELVLHNPVTLKLQESQLPGPDQLRQFQVVCQT
QEDKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPTCVLNGELPLCSRCHI
ISQFNQGFYDCVIATDAEVLGAPVKGKRRGRGSKGDRASDPEAGVARGIDFHHVSAVLNF
DLPPTPEAYIHRAGRTARANNPGMVLTFVLPTEQPHLGTIEELLSGENGAPVLLPYQFRM
EEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSERLRTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGHVPDYLVPPALRGLVHPHKKRKKLASKKVKKAKTQNPLRSFRHRKERSGP
TAVPS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccggaggcgttgggcttcgagcacatgggtctcgacccccggctcctgcag
gccgtcgccgacctgggctggtcacgacccacgctgatccaggagaaggccatcccgctg
gcgctggaggggaaggacctgctggctcgggcccgcacgggctcggggaagacggccgcc
tatgccattcccgtgctgcagctgctgctccacaggaaggcgacaggccctgcagtagag
caggctgtgagaggtctcgtcctggtgcccaccaaggagctggctcggcaggcccggtcc
atgatccagcagctggctgcctactgcgctcgagacatccgggtggctaacgtctctgct
accgaagactcagcctctgagcgagctgtgctgatggagaagcccgacatagtcgtgggg
accccatcgcgcgtcttgaaccacttgcagcagaacagtttggtcctgcgagactccctg
gagctgctggtgctggatgaggctgaccttcttttctcctttggtttcgaggaagaactc
aaaagtctgctctgtcacctgccccggatttatcaggcttttttgatgtcggctaccttt
aacgaggacgtccaagcactcaaggagctggtactccataatccagtgactctcaagctg
caggagtcccagctgccggggccagaccagctgcggcagttccaggtagtctgtcagaca
caggaagataagttcttgctgctctatgccctgctcaagctgtcattgatccgcggcaag
tccttgctctttgtcaacactctggagaggagttaccggctgcgcctgttcctggagcag
ttcagcatccccacctgcgtgctcaatggagagctcccgctgtgctccaggtgccacatc
atttcacagttcaaccagggcttttacgattgcgtcatagcgaccgacgccgaagtcctg
ggggccccggtcaagggcaagcgtcggggccgaggatccaagggggacagggcttctgat
ccggaggcaggcgtggcccggggcatagacttccaccacgtgtctgctgtgctcaacttt
gacctgccccccacccctgaggcctacatccatcgagctggcaggacggcacgcgccaac
aacccgggcatggttttgaccttcgtgctgcccactgagcagccccacctgggcacgatc
gaggagctgctcagcggagagaatggggcccccgtcctgcttccctatcagttccgcatg
gaggagatcgagggcttccgctaccgctgccgggatgccatgcgctcagtgaccaaacag
gccattcgagaggcgaggctgaaggagatcaaggaggagcttctgcactcagagaggctc
aggacgtactttgaagacaacccccgggacctccagctgctgcggcacgacctgcccttg
caccctgccgtggtgaagcctcacctgggccacgtccctgactacctggttccccctgct
ctgcgcggcctcgtccaccctcacaagaagcggaagaagctggcctccaagaaggtcaag
aaggccaagacccagaatcccctgcgcagcttcaggcacagaaaagagagaagtggaccc
acagccgtgccttcctga
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