Neomonachus schauinslandi (Hawaiian monk seal): 110592802
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Entry
110592802 CDS
T08474
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03013
Nucleocytoplasmic transport
nsu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110592802 (CASC3)
03015 mRNA surveillance pathway
110592802 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsu03019
]
110592802 (CASC3)
Messenger RNA biogenesis [BR:
nsu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110592802 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
110592802
NCBI-ProteinID:
XP_021559623
UniProt:
A0A2Y9I6Y8
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All DBs
Position
15:38564376..38580329
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AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIIERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRCGETVKHESSYRSRRLEQTPVR
DPSPEADAQVLDSPEKEEAASEIPAAAPDAAPPAPDRPVEKKSYSRARRTRIKAGDAVKV
AEEVPPPPEGLNPAPQVPETTTPPPAKTGNWEAPVDSATSGLEQDVAQLNIAEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgct
ggaggcggtggcagtggctctctgccttcccagcgcggaggccgagctggggcccttcat
ctgcggcgggtggagagcgggggggctaagagcgccgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgttctgtcggattatgaaagtgcagaagactctgaaggt
gaagaaggggaatacagtgaagaggaaaactccaaagtagagctgaaatcagaagccaat
gatgctgctaattcttcggcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcagagtggggatggacaggagagcacagaacctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaacccagcc
tacatcccccggaaagggctcttttttgagcatgatcttcgagggcaaacacaggaggag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgctgggagcat
gacaagttccgggaagatgaacaagctccaaagtcccgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cccaggtttgggagccctccacagagagatccaaactggattattgagcggccaaacaag
tcccatcgccaccagggtcctgggggcaccctaccaccaaggacatttatcaacaggaat
gctgcagggactggccgaatgtctgctcccaggaattactctcgatctgggggctttaag
gaaggtcgtgctggttttaggcctgtggaggctggtgggcagcacggtggccgttgtggt
gagactgttaaacatgaaagcagttaccgatcacggcgtctagagcagactcccgtgagg
gacccatctccagaagctgatgctcaagtgcttgacagtcctgagaaggaggaggcggcc
tcagagataccagctgctgctcccgatgctgcaccaccggcccctgacaggcctgttgag
aagaaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaaggtt
gcagaggaggtgccccctccacccgaagggctgaacccagcacctcaagtcccagaaacg
acaactcctccacctgctaagactggaaactgggaggctccagtggattctgctacaagt
ggacttgagcaagacgtggcacaactaaatatagcagaacagaattggagtccagggcag
ccttcgttcctgcaaccacgtgagcttcggggtatgcccaaccacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatctcagcggcaaagacctgtgccagagccccctgctcctcctgtgcacatc
agtatcatggagggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccgggcctctat
cccccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggg
gcactgcctcccccaccgccgcctcatctgtatcctaatacgcaggccccatcacaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccacctgaggttgtaagcagg
ggttccagttaa
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